Information on SUBCLASS 4.33.1 |
Subclass Accession number: 8501
Subclass: 4.33.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 29.4 +/- 38.4 Average RMSD (Å) : 0.640 +/- 0.152 Consensus geometry
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Consensus Sequence: | pXXXXpXX |
(φψ)-conformation: | aalbbabb |
Pattern: | [EY] | [EGNQ] | x | [aet] | [akv] | [KY] | [AVY] | x | [EKR] | [IT] | x | [FT] | [APS] | [DT] | [HW] | [ITV] |
Conservation: | 0.364 | -0.487 | -0.372 | -1.456 | -1.218 | 0.623 | -0.412 | -0.243 | 0.746 | 0.141 | -1.466 | 0.286 | -0.147 | 0.815 | 2.593 | 0.235 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fs7_A_248 | 1fs7 | A | 249 | 264 | EQMEAYYDEINFADWT | HHHHHHHHHTT--SEE | aaaaaaaaaalxbabx |
1gu6_A_235 | 1gu6 | A | 236 | 251 | ENMEQYYDKIAFSDWT | HHHHHHHHHTT--SEE | aaaaaaaaaalxbabb |
1j9q_A_203 | 1j9q | A | 203 | 218 | YEDTVKVMRTLTPTHV | HHHHHHHHTTT--SEE | aaaaaaaaaalbxabb |
1nif_*_199 | 1nif | - | 203 | 218 | YEDAVKAMRTLTPTHI | HHHHHHHHTT---SEE | aaaaaaaaaavbxabb |
1qdb_A_253 | 1qdb | A | 254 | 269 | EGMIKYYDEINFSDWT | HHHHHHHHHTT--SEE | aaaaaaaaaalbbabb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fs7_A_248 | 1fs7 | A | CACALCIUM ION | Y - 255 |
1fs7_A_248 | 1fs7 | A | CACALCIUM ION | D - 262 |
1gu6_A_235 | 1gu6 | A | GOLGLYCEROL | V - 235 |
1gu6_A_235 | 1gu6 | A | GOLGLYCEROL | E - 236 |
1gu6_A_235 | 1gu6 | A | GOLGLYCEROL | M - 238 |
1gu6_A_235 | 1gu6 | A | CACALCIUM ION | Y - 242 |
1gu6_A_235 | 1gu6 | A | CACALCIUM ION | D - 249 |
1qdb_A_253 | 1qdb | A | CACALCIUM ION | Y - 260 |
1qdb_A_253 | 1qdb | A | CACALCIUM ION | D - 267 |
Clusters included in this Subclass |
CLUSTER: HE.5.108 |