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Information on SUBCLASS 4.35.1
Subclass Accession number: 8503
Subclass: 4.35.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 12.2 +/- 20.2
Average RMSD (Å) : 0.971 +/- 0.180

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XXcXXXhX
(φψ)-conformation: aagpaabb
Pattern: [gqrs]xxx[AEGKT][aflv]x[cds]xxx[adrt][acgkl][AGK]xx[akns][AGIL][IKTV][afgi]x
Conservation:0.2400.498-0.564-0.9300.415-0.369-0.7320.666-0.189-0.188-1.1290.062-1.4762.785-1.299-0.0690.6730.5291.423-1.0170.675
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dqz_A_2221dqz   A233253RTNQTFRDTYAADGGRNGVFNHHHHHHHHHHHHTT--SEEEEaaaaaaaaaaaaavxNabbbb
1f0n_A_2241f0n   A235255SSNLKFQDAYNAAGGHNAVFNHHHHHHHHHHHHTT--SEEEEaaaaaaaaaaaaavxaabbbb
1gpu_A_1631gpu   A163183GISSEASSLAGHLKLGNLIAIHHHHHHHHHHHHTT-TTEEEEaaaaaaaaaaaaalxaaxbbb
1n8f_A_2781n8f   A279299MDVCADVCQQIAGGEKAIIGVHHHHHHHHHHHHTT--SEEEEaaaaaaaaaaaaagxaaxabb
1qgd_A_1611qgd   A161181GISHEVCSLAGTLKLGKLIAFHHHHHHHHHHHHTT-TTEEEEaaaaaaaaaaaaalxaaxbbb
3tmk_A_1543tmk   A162182QTFMKLLDKEIRKGDESITIVHHHHHHHHHHHHTT--SEEEEaaaaaaaaaaaaagxaabbxb
5mdh_A_465mdh   A4767GVLDGVLMELQDCALPLLKDVHHHHHHHHHHHHT--TTEEEEaaaaaaaaaaaaavbaaxabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f0n_A_2241f0n   A     MPD2-METHYL-2,4-PENTANEDIOL L - 229
1f0n_A_2241f0n   A     MPD2-METHYL-2,4-PENTANEDIOL F - 232
1f0n_A_2241f0n   A     MPD2-METHYL-2,4-PENTANEDIOL V - 233
1f0n_A_2241f0n   A     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID H - 250
1f0n_A_2241f0n   A     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID N - 251
1f0n_A_2241f0n   A     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID A - 252
1f0n_A_2241f0n   A     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID V - 253
1gpu_A_1631gpu   A     CACALCIUM ION D - 185
1gpu_A_1631gpu   A     THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE D - 185
1gpu_A_1631gpu   A     CACALCIUM ION D - 186
1n8f_A_2781n8f   A     PEPPHOSPHOENOLPYRUVATE M - 300
1n8f_A_2781n8f   A     MNMANGANESE (II) ION E - 302
1n8f_A_2781n8f   A     PEPPHOSPHOENOLPYRUVATE E - 302
1qgd_A_1611qgd   A     CACALCIUM ION D - 183
1qgd_A_1611qgd   A     TPPTHIAMINE DIPHOSPHATE D - 183
3tmk_A_1543tmk   A     T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE Q - 157

Clusters included in this Subclass
CLUSTER: HE.4.98