Logo
Information on SUBCLASS 4.41.1
Subclass Accession number: 8510
Subclass: 4.41.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 20.2 +/- 21.1
Average RMSD (Å) : 0.860 +/- 0.392

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XhhpXppp
(φψ)-conformation: aapbaaba
Pattern: [ILMTV][aeqrt]xx[AFIKLMTV][dgntv][DEGPS][dhkqr][rt][knrt][ALV][ILTV][agilvwy]
Conservation:0.918-0.363-1.466-0.062-0.689-0.9080.296-0.1211.3570.0151.1981.358-1.533
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ayl_*_2541ayl   -255267TTLSTDPKRRLIGHHHH--TTSEEEEaaaaxbaabxxab
1b5p_A_1541b5p   A157169VRRAITPRTKALVHHTT--TTEEEEEaaaaxbaaxabbx
1bw0_A_1671bw0   A170182IRRLKDDKTKLLIHHHH--TTEEEEEaaaapbaaxabbb
1gc0_A_1401gc0   A143155LEAAMTPATRVIYHHHH--TTEEEEEaaaaxbaaxabbb
1ibj_A_2071ibj   A210222VAAAIGPQTKLVWHHHH--SSEEEEEaaaaxxaaxabbb
1ii2_A_2271ii2   A228240TTLSADPHRNLIGHHHH--TTSEEEEaaaaxbaabxxab
1jf9_A_1571jf9   A157169LPTLFDEKTRLLAHHHH--TTEEEEEaaaaxbaaxabbb
1o4s_A_1521o4s   A155167VEGLLVGKTKAVLHHHT--TTEEEEEaaaaxbaaxabbb
1ozh_A_3731ozh   A380392MQDIVNSDVTLTVHHHH--TTEEEEEaaaaxbaabxbbb
1p3w_A_1341p3w   A137149LEAAMRDDTILVSHHHH--TTEEEEEaaaaxbaaxabbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ayl_*_2541ayl   *     ATPADENOSINE-5'-TRIPHOSPHATE K - 254
1ayl_*_2541ayl   *     MGMAGNESIUM ION K - 254
1ayl_*_2541ayl   *     ATPADENOSINE-5'-TRIPHOSPHATE T - 255
1ayl_*_2541ayl   *     MGMAGNESIUM ION T - 255
1ayl_*_2541ayl   *     ATPADENOSINE-5'-TRIPHOSPHATE T - 256
1ayl_*_2541ayl   *     MGMAGNESIUM ION T - 256
1ayl_*_2541ayl   *     ATPADENOSINE-5'-TRIPHOSPHATE L - 257
1ayl_*_2541ayl   *     ATPADENOSINE-5'-TRIPHOSPHATE S - 258
1b5p_A_1541b5p   A     PLPPYRIDOXAL-5'-PHOSPHATE N - 171
1bw0_A_1671bw0   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) T - 184
1gc0_A_1401gc0   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) Y - 155
1gc0_A_1401gc0   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) E - 157
1jf9_A_1571jf9   A     PLPPYRIDOXAL-5'-PHOSPHATE T - 171
1o4s_A_1521o4s   A     PLPPYRIDOXAL-5'-PHOSPHATE N - 169
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1ayl_*_2541ayl   * ACTPUTATIVE ACTIVE SITE RESIDUES.K - 254

Clusters included in this Subclass
CLUSTER: HE.3.149
CLUSTER: HE.5.77