Information on SUBCLASS 4.54.1 |
Subclass Accession number: 8528
Subclass: 4.54.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 31.3 +/- 22.9 Average RMSD (Å) : 0.620 +/- 0.396 Consensus geometry
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Consensus Sequence: | KXhXpGhh |
(φψ)-conformation: | aappplpb |
Pattern: | [DGK] | [efhk] | x | x | [AK] | x | [FILM] | [KPR] | [DEQR] | [G] | [ASV] | x | x | [V] | [GN] |
Conservation: | -0.274 | -1.170 | -0.321 | -0.415 | 0.454 | -1.271 | -0.007 | -0.120 | -0.086 | 2.553 | -0.248 | -0.868 | -0.572 | 1.295 | 1.049 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gdh_A_223 | 1gdh | A | 223 | 237 | KATIKSLPQGAIVVN | HHHHTTS-TTEEEEE | aaaaaaxxpvxbbbb |
1mx3_A_249 | 1mx3 | A | 249 | 263 | DFTVKQMRQGAFLVN | HHHHTTS-TTEEEEE | aaaaaaxxxvxbbbb |
1ogs_A_415 | 1ogs | A | 421 | 435 | GHFSKFIPEGSQRVG | HHHHTT--TT-EEEE | aaaaaabxpvxbxbx |
2dld_A_219 | 2dld | A | 219 | 233 | DKSIAEMKDGVVIVN | HHHHTTS-TTEEEEE | aaaaaaxxxvxbbbb |
2nac_A_267 | 2nac | A | 267 | 281 | DETLKLFKRGAYIVN | HHHHTTS-TTEEEEE | aaaaaaxxxvxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
2dld_A_219 | 2dld | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | N - 233 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1ogs_A_415 | 1ogs | A | AC5SO4 BINDING SITE FOR CHAIN A | P - 428 |
Clusters included in this Subclass |
CLUSTER: HE.6.69 |