Information on SUBCLASS 12.1.1 |
Subclass Accession number: 853
Subclass: 12.1.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.4 (>75 %) 3.4 (>75 %) 3.4.21 (>75 %) 3.4.21 (>75 %) 3.4.21 (>75 %) GO : GO:0004175 (>75 %) GO:0004175 (>75 %) GO:0004252 (>75 %) GO:0004252 (>75 %) GO:0004252 (>75 %) GO:0005509 (>75 %) GO:0008233 (>75 %) GO:0008233 (>75 %) GO:0008236 (>75 %) GO:0008236 (>75 %) GO:0008236 (>75 %) SCOP : 50493 (>75 %) 50493 (>75 %) 50493 (>75 %) 50494 (>75 %) 50494 (>75 %) 50494 (>75 %) 50514 (>75 %) 50514 (>75 %) 50514 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 28.0 +/- 21.3 Average RMSD (Å) : 0.325 +/- 0.050 Consensus geometry
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Consensus Sequence: | hXpXphpcXXhpXDhh |
(φψ)-conformation: | bppaapbaaalplpbb |
Pattern: | [ADQ] | [FHV] | [HIY] | [DENT] | [AV] | [AER] | x | [AIV] | [IV] | x | [HN] | [KNP] | [NQR] | [FY] | [DNT] | [DGKQ] | x | [LT] | [ILY] | [DQR] | x | [D] | [IV] | [AM] | [LV] | [ILV] | [HKQR] | [L] |
Conservation: | -0.697 | -1.004 | -0.609 | -0.467 | -0.106 | -0.561 | -1.429 | -0.385 | 0.982 | -1.123 | 1.859 | -0.497 | 0.012 | 1.813 | -0.055 | -0.992 | -1.341 | 0.126 | -0.275 | -0.355 | 0.015 | 2.678 | 0.982 | -0.308 | 0.393 | 0.312 | -0.249 | 1.280 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cgh_A_81 | 1cgh | A | 81 | 108 | QHITARRAIRHPQYNQRTIQNDIMLLQL | EEEEEEEEEE-TT-BTTTTBS--EEEEE | bbbxxabbxxpaapbaaavxlxbbbbxx |
1eq9_A_79 | 1eq9 | A | 79 | 106 | DVYDVEDAVVNKNYDDFLLRNDVALVHL | EEEEEEEEEE-TT-BTTTTB---EEEEE | xbbxxabbbxpaaxbaaalblxbbbbxx |
1fjs_A_81 | 1fjs | A | 81 | 108 | AVHEVEVVIKHNRFTKETYDFDIAVLRL | EEEEEEEEEE-TT-BTTTTBT--EEEEE | bbbxxabbbxxaaxbaaavxvxbbbbxx |
1s83_A_81 | 1s83 | A | 81 | 108 | QFINAAKIITHPNFNGNTLDNDIMLIKL | EEEEEEEEEE-TT--TTT-TT--EEEEE | bbbxxabbbxpaapbaaavxlxbbbbxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HA.12.2 |