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Information on SUBCLASS 4.56.1
Subclass Accession number: 8530
Subclass: 4.56.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 18.2 +/- 21.5
Average RMSD (Å) : 0.800 +/- 0.235

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XAphcXhh
(φψ)-conformation: aalalpbb
Pattern: x[ASTV]xx[AITV]x[AD]xxx[dehn][LTV][GKQ]xx[CLV][FIPTV]
Conservation:-0.5450.308-1.261-1.2610.694-0.8901.369-0.538-0.4921.6210.1951.0020.961-1.2510.1121.124-1.146
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a05_A_131a05   A2238QVLDAVDQAAHLGLRCTHHHHHHHHHHT---EEEaaaaaaaaaavavxbbb
1hkv_A_1201hkv   A120136VSELTAAVKAGVGHIVVHHHHHHHHHHT---EEEaaaaaaaaaavavbbxx
1o6z_A_2481o6z   A254270VAHMVEAILHDTGEVLPHHHHHHHHHTT---EEEaaaaaaaaaalavxxbx
1trb_*_151trb   -1834YTAAVYAARANLQPVLIHHHHHHHHTTT---EEEaaaaaaaaaavalxbbx
1vdc_*_151vdc   -1834HTAAIYAARAELKPLLFHHHHHHHHHTT---EEEaaaaaaaaaavalxbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1o6z_A_2481o6z   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE P - 250
1trb_*_151trb   *     FADFLAVIN-ADENINE DINUCLEOTIDE P - 15
1trb_*_151trb   *     FADFLAVIN-ADENINE DINUCLEOTIDE A - 16
1trb_*_151trb   *     FADFLAVIN-ADENINE DINUCLEOTIDE G - 17
1trb_*_151trb   *     FADFLAVIN-ADENINE DINUCLEOTIDE I - 34
1vdc_*_151vdc   *     FADFLAVIN-ADENINE DINUCLEOTIDE A - 17
1vdc_*_151vdc   *     FADFLAVIN-ADENINE DINUCLEOTIDE F - 34
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1o6z_A_2481o6z   A AC2CL BINDING SITE FOR CHAIN AR - 252
1o6z_A_2481o6z   A AC2CL BINDING SITE FOR CHAIN AH - 256
1vdc_*_151vdc   * FADFAD BINDING SITE.P - 15
1vdc_*_151vdc   * FADFAD BINDING SITE.A - 16

Clusters included in this Subclass
CLUSTER: HE.4.284
CLUSTER: HE.5.221