ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 4.73.1

Subclass Accession number: 8547
Subclass: 4.73.1

Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 2

Average sequence ID (%) : 7.4 +/- 0.0
Average RMSD (Å) : 1.000 +/- 0.000

Consensus geometry

d (Å): 11

delta (°): 90-135

theta (°): 135-180

rho (°): 315-360

Consensus Sequence:	XhGhpcph
(φψ)-conformation:	aalpb_pb

Pattern:	[GQ]	[CG]	x	[GI]	[GL]	[DY]	[AW]	[LM]	[SW]	[NQ]	[AL]	[LV]	[GN]	[FQ]	[EY]	[L]	[GN]	[KW]	[AL]	[G]	[GI]	[EK]	[GK]	[KQ]	[GV]	[AR]	[AT]
Conservation:	-0.361	0.063	-0.998	-1.422	-1.422	-0.361	0.063	0.911	0.063	0.487	-0.574	0.275	0.699	-0.786	-0.149	1.548	0.699	0.275	-0.574	3.245	-1.422	0.699	-0.361	0.699	-0.998	-0.361	0.063

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1b7b_A_75	1b7b	A	83	109	QGSIGYWLSNALNQELNKAGIKKQVAT	HHHHHHHHHHHHHHHHHHTT---EEEE	aaaaaaaaaaaaaaaaaaavxbbxbbb
1mka_A_79	1mka	A	79	105	GCLGLDAMWQLVGFYLGWLGGEGKGRA	HHHHHHHHHHHHHHHHHHTT--SEEEE	aaaaaaaaaaaaaaaaaaavxbexxbx

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1mka_A_79	1mka	A	DAC2-DECENOYL N-ACETYL CYSTEAMINE	G - 79
1mka_A_79	1mka	A	DAC2-DECENOYL N-ACETYL CYSTEAMINE	D - 84
1mka_A_79	1mka	A	DAC2-DECENOYL N-ACETYL CYSTEAMINE	W - 87
1mka_A_79	1mka	A	DAC2-DECENOYL N-ACETYL CYSTEAMINE	Q - 88
1mka_A_79	1mka	A	DAC2-DECENOYL N-ACETYL CYSTEAMINE	V - 90
1mka_A_79	1mka	A	DAC2-DECENOYL N-ACETYL CYSTEAMINE	G - 91
1mka_A_79	1mka	A	DAC2-DECENOYL N-ACETYL CYSTEAMINE	F - 92
1mka_A_79	1mka	A	DAC2-DECENOYL N-ACETYL CYSTEAMINE	G - 103
1mka_A_79	1mka	A	DAC2-DECENOYL N-ACETYL CYSTEAMINE	R - 104
1mka_A_79	1mka	A	DAC2-DECENOYL N-ACETYL CYSTEAMINE	A - 105
1mka_A_79	1mka	A	DAC2-DECENOYL N-ACETYL CYSTEAMINE	L - 106

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1mka_A_79	1mka	A	AC2TWO POLAR RESIDUES ARE FOUND IN THE CATALYTIC REGION OF THE ACTIVE SITE.	D - 84

Clusters included in this Subclass