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Information on SUBCLASS 5.1.2
Subclass Accession number: 8549
Subclass: 5.1.2 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 9

Average sequence ID (%) : 27.1 +/- 24.8
Average RMSD (Å) : 0.833 +/- 0.132

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XphphGDXh
(φψ)-conformation: aapbpgpbb
Pattern: [GKMV][cs][ens][nqstwy][FLWY][hil][cdent][DHNQR][AILMTV][EKNQS][aipv][DG][ADS]x[IMV][EKPS][CFILV]
Conservation:-0.7690.310-0.317-1.3030.650-0.703-1.0540.078-0.3350.244-0.9782.4641.031-0.9081.5380.151-0.098
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cqx_A_2351cqx   A236252VSNLLHDHVNVGDQVKLHHHHHHHH--TT-EEEEaaaaaaaabbpgxbbbb
1f20_A_12101f20   A12101226VCSSWLNRIQADDVVPCHHHHHHTT--TT-EEEEaaaaaaaapbpvpxbxb
1fnb_*_1311fnb   -131147VCSNFLCDLKPGAEVKLHHHHHHHH--TT-EEEEaaaaaaaapbpgxxbxb
1gvh_A_2281gvh   A229245VSNWLHNHANVGDVVKLHHHHHHHT--TT-EEEEaaaaaaaaxbpgxbbbb
1i7p_A_1251i7p   A125141KMSQYLENMNIGDTIEFHHHHHHHT--TT-EEEEaaaaaaaaxbpgxbbxb
1krh_A_1801krh   A181197MSEYLSVQAKAGDKMSFHHHHHHTT--TT-EEEEaaaaaaaapbpgpxbbb
1ogi_A_1161ogi   A116132VCSTYLTHIEPGSEVKIHHHHHHHT--TT-EEEEaaaaaaaaxxpgxxbxb
1qfz_A_1251qfz   A125141VCSNFLCDLKPGSEVKIHHHHHHHH--TT-EEEEaaaaaaaapxpgxxbxb
2pia_*_822pia   -8298GSISFIDDTSEGDAVEVHHHHHHHS--TT-EEEEaaaaaaaabbpgpxbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cqx_A_2351cqx   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 235
1cqx_A_2351cqx   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 236
1cqx_A_2351cqx   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 237
1cqx_A_2351cqx   A     FADFLAVIN-ADENINE DINUCLEOTIDE N - 238
1f20_A_12101f20   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 1210
1f20_A_12101f20   A     FADFLAVIN-ADENINE DINUCLEOTIDE C - 1211
1f20_A_12101f20   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 1212
1f20_A_12101f20   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 1213
1f20_A_12101f20   A     GOLGLYCEROL W - 1214
1f20_A_12101f20   A     GOLGLYCEROL R - 1217
1f20_A_12101f20   A     GOLGLYCEROL I - 1218
1f20_A_12101f20   A     GOLGLYCEROL Q - 1219
1f20_A_12101f20   A     GOLGLYCEROL D - 1222
1f20_A_12101f20   A     FMTFORMIC ACID V - 1228
1f20_A_12101f20   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 1229
1f20_A_12101f20   A     FMTFORMIC ACID R - 1229
1fnb_*_1311fnb   *     FADFLAVIN-ADENINE DINUCLEOTIDE V - 131
1fnb_*_1311fnb   *     FADFLAVIN-ADENINE DINUCLEOTIDE C - 132
1fnb_*_1311fnb   *     FADFLAVIN-ADENINE DINUCLEOTIDE S - 133
1fnb_*_1311fnb   *     FADFLAVIN-ADENINE DINUCLEOTIDE N - 134
1gvh_A_2281gvh   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 228
1gvh_A_2281gvh   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 229
1gvh_A_2281gvh   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 230
1gvh_A_2281gvh   A     FADFLAVIN-ADENINE DINUCLEOTIDE N - 231
1i7p_A_1251i7p   A     FADFLAVIN-ADENINE DINUCLEOTIDE K - 125
1i7p_A_1251i7p   A     FADFLAVIN-ADENINE DINUCLEOTIDE M - 126
1i7p_A_1251i7p   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 127
1i7p_A_1251i7p   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 128
1krh_A_1801krh   A     FADFLAVIN-ADENINE DINUCLEOTIDE K - 180
1krh_A_1801krh   A     FADFLAVIN-ADENINE DINUCLEOTIDE M - 181
1krh_A_1801krh   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 182
1krh_A_1801krh   A     FADFLAVIN-ADENINE DINUCLEOTIDE E - 183
1ogi_A_1161ogi   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 116
1ogi_A_1161ogi   A     FADFLAVIN-ADENINE DINUCLEOTIDE C - 117
1ogi_A_1161ogi   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 118
1ogi_A_1161ogi   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 119
1qfz_A_1251qfz   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 125
1qfz_A_1251qfz   A     FADFLAVIN-ADENINE DINUCLEOTIDE C - 126
1qfz_A_1251qfz   A     FADFLAVIN-ADENINE DINUCLEOTIDE N - 128
2pia_*_822pia   *     FMNFLAVIN MONONUCLEOTIDE G - 82
2pia_*_822pia   *     FMNFLAVIN MONONUCLEOTIDE S - 83
2pia_*_822pia   *     FMNFLAVIN MONONUCLEOTIDE I - 84
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gvh_A_2281gvh   A AC1FAD BINDING SITE FOR CHAIN AQ - 228
1gvh_A_2281gvh   A AC1FAD BINDING SITE FOR CHAIN AS - 230
1ogi_A_1161ogi   A AC1FAD BINDING SITE FOR CHAIN AC - 117
1ogi_A_1161ogi   A AC1FAD BINDING SITE FOR CHAIN AS - 118

Clusters included in this Subclass
CLUSTER: HE.5.93
CLUSTER: HE.6.35