Logo
Information on SUBCLASS 5.1.3
Subclass Accession number: 8550
Subclass: 5.1.3 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 30.8 +/- 28.5
Average RMSD (Å) : 0.700 +/- 0.418

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXGphcpXh
(φψ)-conformation: aapbpgpbb
Pattern: [AFIV][AILTV][GT][dekt][GL][EKRS][AMV][GK][EKN][AT][IVY]x[ILV]
Conservation:-0.718-0.7880.527-1.7720.184-0.2190.1820.9860.4571.2630.345-1.6971.249
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bxk_A_2291bxk   A239251VATTGKVGETYNIHHHH--TT-EEEEaaaaxxpvxbbxb
1e0t_A_1131e0t   A113125FTTDLSVGNTVLVHHHH--TT-EEEEaaaaxbpgpbbbx
1kep_A_2301kep   A240252ILTKGRMGETYLIHHHH--TT-EEEEaaaaxxpvxbbxb
1kew_A_2361kew   A246258VVTEGKAGETYNIHHHH--TT-EEEEaaaaxxpvxbbxb
1pie_A_1821pie   A186198AIGFGEVKKAIELHHHH-BTTEEEEEaaaapbplbbbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bxk_A_2291bxk   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE H - 232
1kep_A_2301kep   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE H - 233
1kew_A_2361kew   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE H - 239
1kew_A_2361kew   A     GOLGLYCEROL G - 253
1kew_A_2361kew   A     GOLGLYCEROL E - 254
1kew_A_2361kew   A     GOLGLYCEROL T - 255
1kew_A_2361kew   A     GOLGLYCEROL Y - 256
1pie_A_1821pie   A     GALD-GALACTOSE L - 182
1pie_A_1821pie   A     GALD-GALACTOSE D - 183
1pie_A_1821pie   A     PO4PHOSPHATE ION D - 183
1pie_A_1821pie   A     GALD-GALACTOSE Q - 184

Clusters included in this Subclass
CLUSTER: HE.4.166