Information on SUBCLASS 5.1.5 |
Subclass Accession number: 8552
Subclass: 5.1.5 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 37.5 +/- 24.6 Average RMSD (Å) : 0.967 +/- 0.379 Consensus geometry
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Consensus Sequence: | pXLpXGXph |
(φψ)-conformation: | aapbpgpbb |
Pattern: | [EQT] | [ST] | [AR] | [AL] | [KQS] | [HL] | [L] | [HKQ] | [AE] | [G] | x | [EK] | [GL] | [MR] | [V] | [ST] |
Conservation: | -0.559 | 0.312 | -0.512 | -0.659 | -0.476 | -0.811 | 1.188 | -0.309 | -0.512 | 2.686 | -0.725 | 0.459 | -1.303 | -0.280 | 1.188 | 0.312 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a8p_*_77 | 1a8p | - | 77 | 92 | TSRLQHLKEGDELMVS | HHHHTT--TT-EEEEE | aaaaaapbxgxbbxbx |
1etr_H_126 | 1etr | H | 127 | 142 | QTAAKLLHAGFKGRVT | HHHHHH--TT-EEEEE | aaaaaaxbpvxbbbxb |
1h8d_H_126 | 1h8d | H | 127 | 142 | ETAASLLQAGYKGRVT | HHHHHH--TT-EEEEE | aaaaaaxbpgxxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a8p_*_77 | 1a8p | * | FADFLAVIN-ADENINE DINUCLEOTIDE | T - 77 |
1a8p_*_77 | 1a8p | * | FADFLAVIN-ADENINE DINUCLEOTIDE | S - 78 |
Clusters included in this Subclass |
CLUSTER: HE.6.169 |