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Information on SUBCLASS 5.5.4
Subclass Accession number: 8568
Subclass: 5.5.4 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 14.0 +/- 15.7
Average RMSD (Å) : 0.650 +/- 0.100

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXpXXhcch
(φψ)-conformation: aapaapabb
Pattern: [GLW][AES]x[AKT][AILV]xx[AKL][AKNT]x[DE][DKP]x[MV][KNR][DGNT][ILV][IMV][ILV]
Conservation:-0.9530.170-1.098-0.2190.030-1.355-0.563-0.650-0.585-1.1502.3360.258-0.8931.1540.693-0.3291.1230.9971.034
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1edz_A_791edz   A7997LEEAIIQANGDDSVNGIMVHHHHHHHHHH-TT--EEEEaaaaaaaaaaxaaxabbbb
1hye_A_111hye   A1331GSATALLLAKEPFMKDLVLHHHHHHHHHT-TT--EEEEaaaaaaaaaaxaaxabbbb
1hzd_A_1071hzd   A111129LSKAVDALKSDKKVRTIIIHHHHHHHHHH-SS-SEEEEaaaaaaaaaapaapabbbb
1nhp_*_1331nhp   -136154WAIKLKQKTVDPEVNNVVVHHHHHHHHHT-TT--EEEEaaaaaaaaaaxaaxabbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1hye_A_111hye   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE R - 11
1hye_A_111hye   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 12
1hye_A_111hye   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 13
1hye_A_111hye   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE I - 32
1hye_A_111hye   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 33
1nhp_*_1331nhp   *     FADFLAVIN-ADENINE DINUCLEOTIDE G - 133

Clusters included in this Subclass
CLUSTER: HE.5.283
CLUSTER: HE.6.230