Information on SUBCLASS 5.7.3 |
Subclass Accession number: 8576
Subclass: 5.7.3 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 24.5 +/- 24.1 Average RMSD (Å) : 1.075 +/- 0.126 Consensus geometry
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Consensus Sequence: | XXLXXcXXh |
(φψ)-conformation: | aapbplpbb |
Pattern: | [AIY] | x | [ES] | x | [IL] | x | [DPR] | x | [L] | x | [EKP] | [DG] | [AT] | x | [AGIL] | [ALT] | x |
Conservation: | -0.586 | -0.851 | 1.108 | -0.727 | 1.453 | -0.990 | -0.366 | -0.255 | 2.162 | -0.558 | 0.425 | 1.307 | 0.796 | -0.727 | -1.095 | -0.382 | -0.713 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1i1n_A_61 | 1i1n | A | 67 | 83 | ALELLFDQLHEGAKALD | HHHHTTTTS-TT-EEEE | aaaaaaaaaxpvxbbbb |
1l5j_A_479 | 1l5j | A | 479 | 495 | IHSWLNRMLLPDTVGTG | HHHHHGGG--TT-EEEE | aaaaaaaaxbplbbbbb |
1np3_A_82 | 1np3 | A | 89 | 105 | YKEEIEPNLKKGATLAF | HHHHTGGG--TT-EEEE | aaaaaaaaxxpvxbbbb |
1r18_A_62 | 1r18 | A | 68 | 84 | ALEYLRDHLKPGARILD | HHHHTTTT--TT-EEEE | aaaaaaaaxbpvxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1i1n_A_61 | 1i1n | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | H - 64 |
1i1n_A_61 | 1i1n | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | D - 83 |
1i1n_A_61 | 1i1n | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | V - 84 |
1l5j_A_479 | 1l5j | A | F3SFE3-S4 CLUSTER | I - 479 |
1l5j_A_479 | 1l5j | A | F3SFE3-S4 CLUSTER | H - 480 |
1r18_A_62 | 1r18 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | H - 65 |
1r18_A_62 | 1r18 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | D - 84 |
1r18_A_62 | 1r18 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | V - 85 |
Clusters included in this Subclass |
CLUSTER: HE.9.23 |