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Information on SUBCLASS 5.7.4
Subclass Accession number: 8577
Subclass: 5.7.4 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 15.7 +/- 15.7
Average RMSD (Å) : 0.933 +/- 0.252

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXhphcphh
(φψ)-conformation: aapbplpbb
Pattern: [ENR]x[E][AKN][ILV]x[ADS][HV][AMV][KT][AP][GN][DRS][IVY][LV][AGI][LTV]
Conservation:-0.113-0.2092.680-0.7870.658-1.365-0.498-0.530-0.4020.2920.9451.183-0.787-0.0170.620-1.269-0.402
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e6c_A_461e6c   A6177ESEALQAVATPNRVVATHHHHHHHHH--SSEEEEaaaaaaaaxbplbbbxb
1k7c_A_531k7c   A5369RFENIADVVTAGDYVIVHHHHHHHH--TT-EEEEaaaaaaaaxbpvxbbbb
1qmg_A_2021qmg   A208224NYEKVFSHMKPNSILGLHHHHHHHHS-TT-EEEEaaaaaaaaxxxvxbxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e6c_A_461e6c   A     MPD2-METHYL-2,4-PENTANEDIOL A - 46
1e6c_A_461e6c   A     MPD2-METHYL-2,4-PENTANEDIOL V - 48
1e6c_A_461e6c   A     MPD2-METHYL-2,4-PENTANEDIOL F - 57
1qmg_A_2021qmg   A     DMV2,3-DIHYDROXY-VALERIANIC ACID D - 202
1qmg_A_2021qmg   A     APX2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHORIBOSE D - 202
1qmg_A_2021qmg   A     MNMANGANESE (II) ION D - 202
1qmg_A_2021qmg   A     APX2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHORIBOSE A - 204
1qmg_A_2021qmg   A     APX2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHORIBOSE Q - 205
1qmg_A_2021qmg   A     APX2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHORIBOSE N - 208

Clusters included in this Subclass
CLUSTER: HE.4.327