|
|
|
|
|
|
|
| Information on SUBCLASS 5.8.2 |
|
Subclass Accession number: 8579
Subclass: 5.8.2 
Type: HE alpha-beta DB: ArchDB-EC Image coordinates: 
 Consensus coordinates:
|
Number of loops: 4 Average sequence ID (%) : 25.0 +/- 23.3 Average RMSD (Å) : 0.500 +/- 0.216 Consensus geometry
|
| Consensus Sequence: | pXchXhhGp |
| (φψ)-conformation: | aalppbaeb |
| Pattern: | x | [AES] | x | [A] | x | [AKQR] | x | [GN] | [AIL] | [KPQ] | [IPV] | [LY] | [AG] | [ER] | [ILMY] | [IV] | [DGS] | [FWY] | [AGQ] | [MT] | [STV] | [CGS] |
| Conservation: | -1.602 | -0.354 | -1.382 | 1.854 | -1.273 | -0.505 | 0.032 | 1.367 | -0.580 | -0.140 | -0.516 | 0.235 | 1.318 | 0.550 | -0.340 | 1.480 | -0.196 | 1.742 | -0.671 | 0.114 | -0.645 | -0.490 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1afw_A_288 | 1afw | A | 288 | 309 | RSVANQLNLPVLGRYIDFQTVG | HHHHHHTT----EEEEEEEEEE | aaaaaaalbxbaebxabbbbbx |
| 1e5m_A_247 | 1e5m | A | 247 | 268 | LESALARGAKIYGEMVGYAMTC | HHHHHHTT----EEEEEEEEEE | aaaaaaavpxbaebxabbbbbb |
| 1kas_*_243 | 1kas | - | 243 | 264 | YEHAKKRGAKIYAELVGFGMSS | HHHHHHHT----EEEEEEEEEE | aaaaaaavxxbaebxabbbbbb |
| 1m3k_A_261 | 1m3k | A | 261 | 282 | EAEASRRGIQPLGRIVSWATVG | HHHHHHHT---SEEEEEEEEEE | aaaaaaavxxxaebxabbbbbx |
| PDB ligands within a cut-off distance of 6 Å in this subclass |
| Loop | PDB | Chain | Ligands | Residue |
| 1m3k_A_261 | 1m3k | A | SULSULFATE ANION | E - 261 |
| 1m3k_A_261 | 1m3k | A | SULSULFATE ANION | A - 262 |
| 1m3k_A_261 | 1m3k | A | SULSULFATE ANION | E - 263 |
| 1m3k_A_261 | 1m3k | A | SULSULFATE ANION | R - 266 |
| Clusters included in this Subclass |
| CLUSTER: HE.5.170 |
| For any comment or web-related incidence, send an email to the webmaster. |
|