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Information on SUBCLASS 5.12.3
Subclass Accession number: 8587
Subclass: 5.12.3 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 13.9 +/- 13.3
Average RMSD (Å) : 0.667 +/- 0.115

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XphhPppXh
(φψ)-conformation: aappaaabb
Pattern: x[IVW]xx[ERY][AIL][AP][P][DE][KST][FKW][GLV]
Conservation:-0.581-0.232-0.872-0.465-0.465-0.2900.5862.6750.980-0.174-0.290-0.872
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jqo_A_5091jqo   A519530HVLAELPPDSFGHHHHHS-STTEEaaaaaxxaaabb
1kbi_A_701kbi   A7081VIDKYIAPEKKLHHHHHS-GGGEEaaaaabxaaaxa
1rhs_*_2741rhs   -277288EWFHRAPPETWVHHHHHS-GGGEEaaaaaxxaaabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kbi_A_701kbi   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 70
1kbi_A_701kbi   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 71
1kbi_A_701kbi   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 74
1kbi_A_701kbi   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 75
1rhs_*_2741rhs   *     CSSS-MERCAPTOCYSTEINE S - 274
1rhs_*_2741rhs   *     CSSS-MERCAPTOCYSTEINE W - 275
1rhs_*_2741rhs   *     CSSS-MERCAPTOCYSTEINE F - 276

Clusters included in this Subclass
CLUSTER: HE.4.329