Information on SUBCLASS 5.16.1 |
Subclass Accession number: 8593
Subclass: 5.16.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 17.6 +/- 16.4 Average RMSD (Å) : 0.814 +/- 0.267 Consensus geometry
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Consensus Sequence: | pXhpXGphh |
(φψ)-conformation: | aabbpgpbb |
Pattern: | x | [afilv] | [enrw] | [eknqt] | [AIL] | [aklv] | [DKPRT] | x | [FGLV] | [dekt] | [afik] | [DG] | [DEGQS] | [fivy] | [GILV] | [aiv] |
Conservation: | -0.971 | -0.489 | -0.552 | -0.372 | 1.124 | -0.387 | -0.009 | -0.862 | -0.263 | -0.150 | -1.230 | 2.995 | 0.523 | -0.146 | 0.257 | 0.534 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1afw_A_380 | 1afw | A | 384 | 399 | QVATILRELKKDQIGV | HHHHHHHHS-TT-EEE | aaaaaaaabbpvxbbb |
1g0o_A_140 | 1g0o | A | 145 | 160 | VAREAYKHLEIGGRLI | HHHHHHHHS-TT-EEE | aaaaaaaaxxxvxbbb |
1k7c_A_53 | 1k7c | A | 53 | 68 | RFENIADVVTAGDYVI | HHHHHHHH--TT-EEE | aaaaaaaaxbpvxbbb |
1pgj_A_80 | 1pgj | A | 85 | 100 | TIEQLKKVFEKGDILV | HHHHHHHH--TT-EEE | aaaaaaaabbpgpbbb |
1qnt_A_94 | 1qnt | A | 98 | 113 | VLWKLLKVVKFGEVIS | HHHHHHHH--TT--EE | aaaaaaaaxxxvbbbx |
2pgd_*_78 | 2pgd | - | 83 | 98 | FIEKLVPLLDIGDIII | HHHHHHHH--TT-EEE | aaaaaaaabxxgxbbb |
2shp_A_13 | 2shp | A | 16 | 31 | AENLLLTRGVDGSFLA | HHHHHHHH--TTEEEE | aaaaaaaabbpvxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g0o_A_140 | 1g0o | A | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | M - 162 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1afw_A_380 | 1afw | A | AVAACTIVE SITE IN CHAIN A. | C - 403 |
Clusters included in this Subclass |
CLUSTER: HE.4.226 |
CLUSTER: HE.6.68 |