Information on SUBCLASS 5.18.2 |
Subclass Accession number: 8596
Subclass: 5.18.2 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 22.2 +/- 16.7 Average RMSD (Å) : 0.300 +/- 0.100 Consensus geometry
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Consensus Sequence: | XXGXXpXXh |
(φψ)-conformation: | aalaaappb |
Pattern: | [IMV] | [KPQ] | x | [AIV] | [HR] | [GKQ] | [AT] | [L] | x | [AE] | [AQ] | [G] | [FLT] | x | [DEH] | [IT] | [AKR] | [IV] |
Conservation: | 0.324 | -0.312 | -1.344 | -0.232 | 0.704 | -0.709 | 0.128 | 1.356 | -1.265 | -0.202 | -0.202 | 2.786 | -0.788 | -0.868 | 0.165 | -0.179 | -0.391 | 1.029 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aq0_A_102 | 1aq0 | A | 106 | 123 | MKNVHGALVAAGLGHIKV | HHHHHHHHHHTT-TTSEE | aaaaaaaaaaavaaaxxb |
1jcl_A_53 | 1jcl | A | 53 | 70 | IPIARKTLKEQGTPEIRI | HHHHHHHHHHTT-TTSEE | aaaaaaaaaaavaaaxxb |
1l6s_A_170 | 1l6s | A | 171 | 188 | VQAIRQALDAAGFKDTAI | HHHHHHHHHHTT-TT-EE | aaaaaaaaaaavaaaxxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1jcl_A_53 | 1jcl | A | HPD1-HYDROXY-PENTANE-3,4-DIOL-5-PHOSPHATE | T - 72 |
1jcl_A_53 | 1jcl | A | HPD1-HYDROXY-PENTANE-3,4-DIOL-5-PHOSPHATE | V - 73 |
1l6s_A_170 | 1l6s | A | MGMAGNESIUM ION | Q - 170 |
Clusters included in this Subclass |
CLUSTER: HE.5.232 |