Information on SUBCLASS 5.30.1 |
Subclass Accession number: 8608
Subclass: 5.30.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 12.2 +/- 12.1 Average RMSD (Å) : 0.775 +/- 0.222 Consensus geometry
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Consensus Sequence: | hXXhhXpph |
(φψ)-conformation: | aappgpabb |
Pattern: | [ILVY] | [DEHK] | x | [AIVW] | [AGL] | [AQS] | x | [AEP] | [AG] | x | [ADRT] | [EGR] | [AIPV] | [FLVW] | [ILV] |
Conservation: | 0.264 | 0.194 | -0.372 | -0.867 | -1.097 | 0.243 | -0.937 | 0.339 | 2.490 | 0.464 | -1.079 | -0.201 | -0.725 | -0.301 | 1.585 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cjw_A_135 | 1cjw | A | 144 | 158 | LHHVGAQPAVRRAVL | HHHHHTSTT--EEEE | aaaaaaxxNxabbbb |
1dxe_A_161 | 1dxe | A | 161 | 175 | VDAIAATEGVDGIFV | HHHHHTSTT--EEEE | aaaaaaxxgxabbbx |
1h7e_A_29 | 1h7e | A | 34 | 48 | YERALQVAGVAEVWV | HHHHHT-TT--EEEE | aaaaaaxxvbabbbb |
1jz7_A_520 | 1jz7 | A | 520 | 534 | IKKWLSLPGETRPLI | HHHHHTSTT----EE | aaaaaappvxaxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cjw_A_135 | 1cjw | A | COTCOA-S-ACETYL TRYPTAMINE | K - 135 |
1cjw_A_135 | 1cjw | A | COTCOA-S-ACETYL TRYPTAMINE | G - 136 |
1cjw_A_135 | 1cjw | A | COTCOA-S-ACETYL TRYPTAMINE | S - 137 |
1cjw_A_135 | 1cjw | A | COTCOA-S-ACETYL TRYPTAMINE | V - 138 |
1cjw_A_135 | 1cjw | A | COTCOA-S-ACETYL TRYPTAMINE | L - 158 |
1cjw_A_135 | 1cjw | A | COTCOA-S-ACETYL TRYPTAMINE | M - 159 |
1cjw_A_135 | 1cjw | A | COTCOA-S-ACETYL TRYPTAMINE | C - 160 |
1dxe_A_161 | 1dxe | A | PO4PHOSPHATE ION | F - 174 |
1dxe_A_161 | 1dxe | A | PO4PHOSPHATE ION | V - 175 |
1jz7_A_520 | 1jz7 | A | GALD-GALACTOSE | E - 537 |
Clusters included in this Subclass |
CLUSTER: HE.5.231 |
CLUSTER: HE.7.150 |