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Information on SUBCLASS 5.30.1
Subclass Accession number: 8608
Subclass: 5.30.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 12.2 +/- 12.1
Average RMSD (Å) : 0.775 +/- 0.222

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: hXXhhXpph
(φψ)-conformation: aappgpabb
Pattern: [ILVY][DEHK]x[AIVW][AGL][AQS]x[AEP][AG]x[ADRT][EGR][AIPV][FLVW][ILV]
Conservation:0.2640.194-0.372-0.867-1.0970.243-0.9370.3392.4900.464-1.079-0.201-0.725-0.3011.585
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cjw_A_1351cjw   A144158LHHVGAQPAVRRAVLHHHHHTSTT--EEEEaaaaaaxxNxabbbb
1dxe_A_1611dxe   A161175VDAIAATEGVDGIFVHHHHHTSTT--EEEEaaaaaaxxgxabbbx
1h7e_A_291h7e   A3448YERALQVAGVAEVWVHHHHHT-TT--EEEEaaaaaaxxvbabbbb
1jz7_A_5201jz7   A520534IKKWLSLPGETRPLIHHHHHTSTT----EEaaaaaappvxaxxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cjw_A_1351cjw   A     COTCOA-S-ACETYL TRYPTAMINE K - 135
1cjw_A_1351cjw   A     COTCOA-S-ACETYL TRYPTAMINE G - 136
1cjw_A_1351cjw   A     COTCOA-S-ACETYL TRYPTAMINE S - 137
1cjw_A_1351cjw   A     COTCOA-S-ACETYL TRYPTAMINE V - 138
1cjw_A_1351cjw   A     COTCOA-S-ACETYL TRYPTAMINE L - 158
1cjw_A_1351cjw   A     COTCOA-S-ACETYL TRYPTAMINE M - 159
1cjw_A_1351cjw   A     COTCOA-S-ACETYL TRYPTAMINE C - 160
1dxe_A_1611dxe   A     PO4PHOSPHATE ION F - 174
1dxe_A_1611dxe   A     PO4PHOSPHATE ION V - 175
1jz7_A_5201jz7   A     GALD-GALACTOSE E - 537

Clusters included in this Subclass
CLUSTER: HE.5.231
CLUSTER: HE.7.150