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Information on SUBCLASS 5.42.1
Subclass Accession number: 8620
Subclass: 5.42.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 32.1 +/- 22.1
Average RMSD (Å) : 0.533 +/- 0.231

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXGpXGXhX
(φψ)-conformation: aalapgabb
Pattern: [AN][EKM]x[AG]xx[L]xx[DE][A]x[KV][AIK][AT][G][HSY]x[G][KM][ILV][EKP]x[AG]xx
Conservation:0.010-0.535-0.6770.218-1.019-0.4791.241-0.615-0.9611.0811.241-0.615-0.393-1.1040.1112.519-0.109-1.1042.5190.0240.388-0.251-0.6150.449-0.535-0.789
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1one_A_2211one   A221246AEEALDLIVDAIKAAGHDGKVKIGLDHHHHHHHHHHHHHHHT-TTT-EEEEEaaaaaaaaaaaaaaavapvabbbbbb
1pdz_*_2191pdz   -219244NKDALDLIQEAIKKAGYTGKIEIGMDHHHHHHHHHHHHHHHT-BTTBEEEEEaaaaaaaaaaaaaaavapvabbbbbb
2ayq_A_2422ayq   A242267NMFGDILSDEASVITGSLGMLPSASLHHHHHHHHHHHHHHTT-TTS-EEEEEaaaaaaaaaaaaaaavapgaxbbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1one_A_2211one   A     MGMAGNESIUM ION D - 246
1one_A_2211one   A     PEPPHOSPHOENOLPYRUVATE D - 246
1one_A_2211one   A     PAG2-PHOSPHO-D-GLYCERIC ACID D - 246
1pdz_*_2191pdz   *     PGA2-PHOSPHOGLYCOLIC ACID D - 244
1pdz_*_2191pdz   *     MNMANGANESE (II) ION D - 244

Clusters included in this Subclass
CLUSTER: HE.6.153