Information on SUBCLASS 5.44.1 |
Subclass Accession number: 8622
Subclass: 5.44.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 29.2 +/- 34.3 Average RMSD (Å) : 0.833 +/- 0.404 Consensus geometry
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Consensus Sequence: | phNXpcXXh |
(φψ)-conformation: | aalbplpbb |
Pattern: | [NS] | [AEL] | x | [CS] | [AGK] | x | [AN] | [FK] | [NV] | [KL] | [AI] | x | [EK] | [AL] | [N] | x | [NR] | [DG] | [AD] | x | [IW] | [EK] | [IL] | [DY] |
Conservation: | 0.784 | -1.219 | -1.219 | 0.918 | -0.702 | -0.615 | -0.189 | -0.420 | -0.750 | -0.430 | -0.288 | -0.902 | 0.873 | -0.108 | 3.183 | -1.133 | 0.731 | 0.499 | -0.366 | -0.902 | 0.634 | 0.873 | 0.863 | -0.115 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b16_A_214 | 1b16 | A | 214 | 237 | SEQCGQNFVKAIEANKNGAIWKLD | HHHHHHHHHHHHHH--TT-EEEEE | aaaaaaaaaaaaaalbpvxbxbbb |
1eke_A_81 | 1eke | A | 87 | 110 | NAFSKVAKNLIEKLNIRDDEIEIY | HHHHHHHHHHHHHTT--SSEEEEE | aaaaaaaaaaaaaalxblbxbbbb |
1mg5_A_215 | 1mg5 | A | 215 | 238 | SLACAENFVKAIELNQNGAIWKLD | HHHHHHHHHHHHHH--TT-EEEEE | aaaaaaaaaaaaaalbpvxbxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1eke_A_81 | 1eke | A | MSESELENOMETHIONINE | L - 81 |
1eke_A_81 | 1eke | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | L - 81 |
1eke_A_81 | 1eke | A | MSESELENOMETHIONINE | I - 84 |
1eke_A_81 | 1eke | A | MSESELENOMETHIONINE | E - 85 |
1eke_A_81 | 1eke | A | MSESELENOMETHIONINE | D - 105 |
1eke_A_81 | 1eke | A | MSESELENOMETHIONINE | E - 106 |
1eke_A_81 | 1eke | A | MSESELENOMETHIONINE | I - 107 |
1eke_A_81 | 1eke | A | MSESELENOMETHIONINE | E - 108 |
1eke_A_81 | 1eke | A | MSESELENOMETHIONINE | Y - 110 |
Clusters included in this Subclass |
CLUSTER: HE.5.333 |