ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 5.52.1

Subclass Accession number: 8630
Subclass: 5.52.1

Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 2

Average sequence ID (%) : 21.9 +/- 0.0
Average RMSD (Å) : 0.300 +/- 0.000

Consensus geometry

d (Å): 13

delta (°): 0-45

theta (°): 45-90

rho (°): 90-135

Consensus Sequence:	ppChXGIph
(φψ)-conformation:	aa_aaapbb

Pattern:	[ER]	[P]	[MV]	[IV]	[GI]	[HQ]	[AN]	[FM]	[FL]	[EQ]	[S]	[V]	[HR]	[IL]	[L]	[AT]	[DN]	[AG]	[CM]	[EY]	[NS]	[FL]	x	[EK]	[HK]	[C]	[AI]	[NV]	[G]	[I]	[ET]	[AP]
Conservation:	-0.356	2.306	-0.208	0.236	-1.539	0.088	-0.947	-0.208	-0.356	0.236	0.531	0.531	0.088	-0.060	0.531	-0.504	0.236	-0.356	-0.060	-0.652	-0.060	-0.356	-1.243	-0.060	-0.208	3.489	-0.947	-1.243	1.714	0.531	-0.652	-0.504

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1fur_A_362	1fur	A	362	393	RPMVIHNFLQSVRLLADGMESFNKHCAVGIEP	HHHHHHHHHHHHHHHHHHHHHHHHHTGGG-EE	aaaaaaaaaaaaaaaaaaaaaaaaaIaaaxbx
1jsw_A_365	1jsw	A	365	396	EPVIGQAMFESVHILTNACYNLLEKCINGITA	HHHHHHHHHHHHHHHHHHHHHHHHHTGGG-EE	aaaaaaaaaaaaaaaaaaaaaaaaaaaaaxbb

PDB ligands within a cut-off distance of 6 Å in this subclass

Clusters included in this Subclass