Information on SUBCLASS 6.1.4 |
Subclass Accession number: 8635
Subclass: 6.1.4 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 26.9 +/- 27.7 Average RMSD (Å) : 0.475 +/- 0.171 Consensus geometry
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Consensus Sequence: | pXXhhhXphX |
(φψ)-conformation: | aagppaaabb |
Pattern: | [EHQR] | [GILM] | [an] | [AVY] | [l] | [ALM] | [AV] | [EQ] | [AK] | x | [IV] | [AP] | [LPY] | [dw] | x | [IV] | [FLT] | [AEL] |
Conservation: | 0.157 | -0.970 | -1.096 | -0.490 | -0.128 | -0.099 | 0.506 | 1.687 | 0.248 | 0.277 | 1.590 | 1.297 | -0.850 | -1.063 | -1.226 | 1.593 | -0.409 | -1.026 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1d4o_A_70 | 1d4o | A | 70 | 87 | QLNVLLAEAGVPYDIVLE | HHHHHHHHHT--GGGEEE | aaaaaaaaagxxaaabbx |
1onw_A_263 | 1onw | A | 265 | 282 | EGIARAVQAGIPLARVTL | HHHHHHHHTT--GGGEEE | aaaaaaaaavxxaaabbb |
1pjr_*_37 | 1pjr | - | 44 | 61 | RIAYLMAEKHVAPWNILA | HHHHHHHTT---GGGEEE | aaaaaaaaavxxaaabbb |
1pno_A_355 | 1pno | A | 355 | 372 | HMNVLLAEANVPYDEVFE | HHHHHHHHTT--GGGEEE | aaaaaaaaavxpaaabbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1d4o_A_70 | 1d4o | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | Q - 70 |
1d4o_A_70 | 1d4o | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | L - 71 |
1pno_A_355 | 1pno | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | H - 355 |
1pno_A_355 | 1pno | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | M - 356 |
Clusters included in this Subclass |
CLUSTER: HE.6.232 |
CLUSTER: HE.8.56 |