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Information on SUBCLASS 6.4.2
Subclass Accession number: 8642
Subclass: 6.4.2 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 15.2 +/- 21.0
Average RMSD (Å) : 0.720 +/- 0.335

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XXchphpphX
(φψ)-conformation: aalppaaabb
Pattern: [ILMY][APVY]x[gn][AKV][ilv]x[ALT][FMY][CILTV][AES]xx[DGN][AIV][KPQR][lp][DEK][KNRW][CIL][fkl]
Conservation:0.507-0.880-0.064-0.111-0.144-0.189-0.9990.0551.312-0.0410.442-1.364-1.6371.3371.4350.509-1.0371.671-0.1890.966-1.579
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1kz1_A_291kz1   A3555LVKGAVETMIEKHDVKLENIDHHHHHHHHHHHHH---GGGEEaaaaaaaaaaaaavxxaaabx
1n3l_A_871n3l   A96116YYENVIKAMLESIGVPLEKLKHHHHHHHHHHHHHT---TTEEaaaaaaaaaaaaavbwaaaxb
1o0s_A_1941o0s   A195215IPVGKLALYVALGGVQPKWCLHHHHHHHHHHHHH---GGGEEaaaaaaaaaaaaavpxaaaxb
1pj3_A_1791pj3   A179199IPVGKLCLYTACAGIRPDRCLHHHHHHHHHHHHH---GGGEEaaaaaaaaaaaaavxxaaabb
1qfj_A_2031qfj   A205225MAKIARDLFCSERNAREDRLFHHHHHHHHHHHHS---GGGEEaaaaaaaaaaaaalxxaaabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1pj3_A_1791pj3   A     MSESELENOMETHIONINE I - 179
1pj3_A_1791pj3   A     MNMANGANESE (II) ION I - 179
1pj3_A_1791pj3   A     MSESELENOMETHIONINE P - 180
1pj3_A_1791pj3   A     MSESELENOMETHIONINE V - 181
1pj3_A_1791pj3   A     MSESELENOMETHIONINE G - 182
1pj3_A_1791pj3   A     MNMANGANESE (II) ION K - 183
1pj3_A_1791pj3   A     PYRPYRUVIC ACID K - 183
1pj3_A_1791pj3   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE K - 183
1pj3_A_1791pj3   A     MSESELENOMETHIONINE C - 185
1pj3_A_1791pj3   A     MSESELENOMETHIONINE L - 186
1pj3_A_1791pj3   A     MSESELENOMETHIONINE C - 190
1pj3_A_1791pj3   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 192
1pj3_A_1791pj3   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 193
1pj3_A_1791pj3   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE R - 194
1pj3_A_1791pj3   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE R - 197
1pj3_A_1791pj3   A     MSESELENOMETHIONINE P - 200
1pj3_A_1791pj3   A     MSESELENOMETHIONINE V - 201
1pj3_A_1791pj3   A     MSESELENOMETHIONINE C - 202
1pj3_A_1791pj3   A     MSESELENOMETHIONINE D - 204
1qfj_A_2031qfj   A     GOLGLYCEROL F - 203

Clusters included in this Subclass
CLUSTER: HE.6.79