Information on SUBCLASS 6.4.2 |
Subclass Accession number: 8642
Subclass: 6.4.2 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 15.2 +/- 21.0 Average RMSD (Å) : 0.720 +/- 0.335 Consensus geometry
|
Consensus Sequence: | XXchphpphX |
(φψ)-conformation: | aalppaaabb |
Pattern: | [ILMY] | [APVY] | x | [gn] | [AKV] | [ilv] | x | [ALT] | [FMY] | [CILTV] | [AES] | x | x | [DGN] | [AIV] | [KPQR] | [lp] | [DEK] | [KNRW] | [CIL] | [fkl] |
Conservation: | 0.507 | -0.880 | -0.064 | -0.111 | -0.144 | -0.189 | -0.999 | 0.055 | 1.312 | -0.041 | 0.442 | -1.364 | -1.637 | 1.337 | 1.435 | 0.509 | -1.037 | 1.671 | -0.189 | 0.966 | -1.579 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1kz1_A_29 | 1kz1 | A | 35 | 55 | LVKGAVETMIEKHDVKLENID | HHHHHHHHHHHHH---GGGEE | aaaaaaaaaaaaavxxaaabx |
1n3l_A_87 | 1n3l | A | 96 | 116 | YYENVIKAMLESIGVPLEKLK | HHHHHHHHHHHHHT---TTEE | aaaaaaaaaaaaavbwaaaxb |
1o0s_A_194 | 1o0s | A | 195 | 215 | IPVGKLALYVALGGVQPKWCL | HHHHHHHHHHHHH---GGGEE | aaaaaaaaaaaaavpxaaaxb |
1pj3_A_179 | 1pj3 | A | 179 | 199 | IPVGKLCLYTACAGIRPDRCL | HHHHHHHHHHHHH---GGGEE | aaaaaaaaaaaaavxxaaabb |
1qfj_A_203 | 1qfj | A | 205 | 225 | MAKIARDLFCSERNAREDRLF | HHHHHHHHHHHHS---GGGEE | aaaaaaaaaaaaalxxaaabb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HE.6.79 |