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Information on SUBCLASS 6.4.3
Subclass Accession number: 8643
Subclass: 6.4.3 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 17.9 +/- 16.4
Average RMSD (Å) : 0.720 +/- 0.396

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: pXGhXXpRhh
(φψ)-conformation: aalppaaabb
Pattern: [EMR]xxxxx[AFL][ekl][ENRS][ael][GN][ILV]x[ADEGP][AES][DR][IVY][fhvy][FIY]
Conservation:0.085-0.332-0.523-0.923-1.186-0.9400.100-0.9600.349-0.9652.5091.416-0.660-0.7350.6241.2640.686-0.5090.701
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cqx_A_3711cqx   A375393RMQHDALKNLGIHEARIHYHHHHHHHHHTT--GGGEEEaaaaaaaaaavxxaaabbb
1dp4_A_2161dp4   A220238RNLMLLALNAGLTGEDYVFHHHHHHHHHTT--TTT-EEaaaaaaaaaavxbaaabbb
1ej2_A_521ej2   A5775MMLTKALSENGIPASRYYIHHHHHHHHHTT--GGGEEEaaaaaaaaaavxwaaabbb
1hzy_A_2081hzy   A210228EQQAAIFESEGLSPSRVCIHHHHHHHHHTT--GGGEEEaaaaaaaaaavxxaaabbx
1vgv_A_1501vgv   A150168ETSRQNLLRENVADSRIFIHHHHHHHHHTT--GGGEEEaaaaaaaaaavxxaaabbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cqx_A_3711cqx   A     DGG1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL I - 371
1cqx_A_3711cqx   A     DGG1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL M - 374
1cqx_A_3711cqx   A     DGG1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL R - 375
1cqx_A_3711cqx   A     DGG1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL Y - 393
1vgv_A_1501vgv   A     MSESELENOMETHIONINE S - 164
1vgv_A_1501vgv   A     MSESELENOMETHIONINE R - 165
1vgv_A_1501vgv   A     MSESELENOMETHIONINE F - 167

Clusters included in this Subclass
CLUSTER: HE.6.125
CLUSTER: HE.7.72