Information on SUBCLASS 6.18.1 |
Subclass Accession number: 8662
Subclass: 6.18.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 21.8 +/- 19.2 Average RMSD (Å) : 0.840 +/- 0.251 Consensus geometry
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Consensus Sequence: | XLchXXphXh |
(φψ)-conformation: | aalppaapbb |
Pattern: | [AIV] | x | [DEKTY] | x | [FL] | x | [DHK] | x | [L] | [GNQ] | [LV] | [KPRS] | [ENPS] | [DEHNS] | [AVWY] | [AKV] | x |
Conservation: | 0.369 | -1.245 | -0.834 | -1.320 | 1.145 | -0.423 | 0.187 | -0.818 | 2.604 | 0.699 | 1.255 | -0.166 | -0.139 | 0.175 | -0.543 | -0.397 | -0.550 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bjn_A_44 | 1bjn | A | 53 | 69 | AEKDFRDLLNVPSNYKV | HHHHHHHHHT--TTEEE | aaaaaaaaalxpaabbb |
1cmx_A_15 | 1cmx | A | 17 | 33 | VFTNFAHKLGLKNEWAY | HHHHHHHHHTB-TTEEE | aaaaaaaaaNppaabbx |
1ee0_A_145 | 1ee0 | A | 145 | 161 | ADYQLVKLLGLSPSVKR | HHHHHHHHHT--TT-EE | aaaaaaaaavxpaaxxb |
1hzp_A_248 | 1hzp | A | 250 | 266 | INELLVKNLQLRPDAVV | HHHHHHHHTT--TT-EE | aaaaaaaaavxxaaxxb |
1mzj_A_261 | 1mzj | A | 263 | 279 | IIDVLVDRLGVPEHVVV | HHHHHHHHHT--TTSEE | aaaaaaaaavxwaaxxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | S - 248 |
1hzp_A_248 | 1hzp | A | DAOLAURIC ACID | R - 249 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | R - 249 |
1hzp_A_248 | 1hzp | A | DAOLAURIC ACID | I - 250 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | E - 252 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | V - 255 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | K - 256 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | Q - 259 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | L - 260 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | R - 261 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | P - 262 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | D - 263 |
1hzp_A_248 | 1hzp | A | GOLGLYCEROL | V - 265 |
1mzj_A_261 | 1mzj | A | COACOENZYME A | R - 262 |
1mzj_A_261 | 1mzj | A | COACOENZYME A | I - 263 |
Clusters included in this Subclass |
CLUSTER: HE.5.185 |
CLUSTER: HE.6.118 |