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Information on SUBCLASS 8.1.1
Subclass Accession number: 8713
Subclass: 8.1.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 24

Average sequence ID (%) : 33.7 +/- 24.7
Average RMSD (Å) : 0.608 +/- 0.217

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XXhpHXphhpLX
(φψ)-conformation: aapbbaabppba
Pattern: [adegknqrs][e][aiklv]x[ilmtv][alm][agkqrs]x[filv][dknqrst][chn][dehkpq]x[filv][cilv][akqrt][flmv]xx[fitvy][cfgilvy]
Conservation:-0.4772.891-0.606-1.2700.2450.123-0.644-0.9370.462-0.2661.470-0.385-0.4980.8921.0020.1050.977-0.885-0.766-0.537-0.896
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a06_*_651a06   -6585NEIAVLHKIKHPNIVALDDIYHHHHHHHT---TTB--EEEEEaaaaaaaaxbbaabxxbabbb
1apm_E_851apm   E90110NEKRILQAVNFPFLVKLEFSFHHHHHHHH---TTB--EEEEEaaaaaaaaxbbaabxxxabbb
1fmk_*_3041fmk   -309329QEAQVMKKLRHEKLVQLYAVVHHHHHHHH---TTB--EEEEEaaaaaaaaxbbaabxxxabbb
1fot_A_1291fot   A134154DERLMLSIVTHPFIIRMWGTFHHHHHHHS--BTTB--EEEEEaaaaaaaabbbaabpbbaebe
1gz8_A_461gz8   A5070REISLLKELNHPNIVKLLDVIHHHHHHTT---TTB--EEEEEaaaaaaaaxbbaabpxxabbb
1h1w_A_1241h1w   A129149RERDVMSRLDHPFFVKLYFTFHHHHHHHH---TTB--EEEEEaaaaaaaaxbbaabxxbabbb
1h26_C_461h26   C5070REISLLKELNHPNIVKLLDVIHHHHHHHT---TTB--EEEEEaaaaaaaabbbaabpxxabbb
1h4l_A_441h4l   A5070REICLLKELKHKNIVRLHDVLHHHHHHTT--BTTB--EEEEEaaaaaaaabbbaabpxbabbb
1ia8_A_491ia8   A5474KEICINKMLNHENVVKFYGHRHHHHHHHH---TTB--EEEEEaaaaaaaaxbbaabpxbaebb
1ir3_A_10381ir3   A10461066NEASVMKGFTCHHVVRLLGVVHHHHHHHT---TTB--EEEEEaaaaaaaabbbaabpxxaebb
1j1b_A_961j1b   A96116RELQIMRKLDHCNIVRLRYFFHHHHHHHT---TTB--EEEEEaaaaaaaaxbbaabpxxabbb
1jks_A_581jks   A6383REVSILKEIQHPNVITLHEVYHHHHHHHH---TTB--EEEEEaaaaaaaaxbbaabxbbabbb
1jpa_A_6691jpa   A677697SEASIMGQFDHPNVIHLEGVVHHHHHHTT---TTB--EEEEEaaaaaaaabbbaabpxxaebb
1k2p_A_4391k2p   A444464EEAKVMMNLSHEKLVQLYGVCHHHHHHHT---TTB--EEEEEaaaaaaaaxbbaabxxxabbb
1luf_A_6161luf   A624644REAALMAEFDNPNIVKLLGVCHHHHHHHT---TTB--EEEEEaaaaaaaaxbbaabpxxabbb
1m14_A_7291m14   A737757DEAYVMASVDNPHVCRLLGICHHHHHHHT---TTB--EEEEEaaaaaaaabbbaabpxxaebb
1mp8_A_4621mp8   A470490QEALTMRQFDHPHIVKLIGVIHHHHHHHT---TTB--EEEEEaaaaaaaabbbaabpxxaebb
1mq4_A_1751mq4   A180200REVEIQSHLRHPNILRLYGYFHHHHHHHH---TTB--EEEEEaaaaaaaaxbbaabxxbaebb
1mqb_A_6541mqb   A662682GEAGIMGQFSHHNIIRLEGVIHHHHHHHT---TTB--EEEEEaaaaaaaabbbaabpxxaebb
1o6y_A_501o6y   A5878REAQNAAALNHPAIVAVYDTGHHHHHHHT---TTB--EEEEEaaaaaaaabbbaabpxbabbb
1p4o_A_10111p4o   A10191039NEASVMKEFNCHHVVRLLGVVHHHHHGGG---TTB--EEEEEaaaaaaaaxbbaabpxxaebb
1pyx_B_961pyx   B96116RELQIMRKLDHCNIVRLRYFFHHHHHHTT---TTB--EEEEEaaaaaaaaxbbaabpxxabbb
1qcf_A_3041qcf   A309329AEANVMKTLQHDKLVKLHAVVHHHHHHTT---TTB--EEEEEaaaaaaaaxxbaabxxbabbb
1qpc_A_2821qpc   A287307AEANLMKQLQHQRLVRLYAVVHHHHHHHH---TTB--EEEEEaaaaaaaabbbaabpxxabbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1apm_E_851apm   E     PHOPHEOPHYTIN A H - 87
1apm_E_851apm   E     PHOPHEOPHYTIN A N - 90
1apm_E_851apm   E     OCTN-OCTANE F - 100
1gz8_A_461gz8   A     MBP1-[(2-AMINO-6,9-DIHYDRO-1H-PURIN-6-YL)OXY]-3-METHYL-2-BUTANOL V - 64
1h1w_A_1241h1w   A     SEPPHOSPHOSERINE Y - 126
1h1w_A_1241h1w   A     GOLGLYCEROL Y - 126
1h1w_A_1241h1w   A     GOLGLYCEROL V - 127
1h1w_A_1241h1w   A     SEPPHOSPHOSERINE R - 129
1h1w_A_1241h1w   A     GOLGLYCEROL E - 130
1h1w_A_1241h1w   A     ATPADENOSINE-5'-TRIPHOSPHATE E - 130
1h1w_A_1241h1w   A     GOLGLYCEROL P - 140
1h1w_A_1241h1w   A     ATPADENOSINE-5'-TRIPHOSPHATE V - 143
1h1w_A_1241h1w   A     GOLGLYCEROL Y - 146
1h26_C_461h26   C     TPOPHOSPHOTHREONINE R - 50
1ir3_A_10381ir3   A     MGMAGNESIUM ION E - 1043
1ir3_A_10381ir3   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER E - 1047
1ir3_A_10381ir3   A     MGMAGNESIUM ION E - 1047
1ir3_A_10381ir3   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER V - 1060
1j1b_A_961j1b   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER E - 97
1j1b_A_961j1b   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER V - 110
1jpa_A_6691jpa   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER I - 691
1mp8_A_4621mp8   A     ADPADENOSINE-5'-DIPHOSPHATE F - 468
1mp8_A_4621mp8   A     ADPADENOSINE-5'-DIPHOSPHATE E - 471
1mp8_A_4621mp8   A     ADPADENOSINE-5'-DIPHOSPHATE V - 484
1mq4_A_1751mq4   A     PO4PHOSPHATE ION H - 176
1mq4_A_1751mq4   A     PO4PHOSPHATE ION Q - 177
1mq4_A_1751mq4   A     PO4PHOSPHATE ION R - 180
1mq4_A_1751mq4   A     MGMAGNESIUM ION E - 181
1mq4_A_1751mq4   A     ADPADENOSINE-5'-DIPHOSPHATE E - 181
1mq4_A_1751mq4   A     ADPADENOSINE-5'-DIPHOSPHATE L - 194
1mqb_A_6541mqb   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER I - 676
1o6y_A_501o6y   A     ACPPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER E - 59
1o6y_A_501o6y   A     MGMAGNESIUM ION E - 59
1o6y_A_501o6y   A     ACPPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER V - 72
1pyx_B_961pyx   B     MGMAGNESIUM ION E - 97
1qcf_A_3041qcf   A     PP11-TER-BUTYL-3-P-TOLYL-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-YLAMINE V - 323
1qcf_A_3041qcf   A     PP11-TER-BUTYL-3-P-TOLYL-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-YLAMINE L - 325
1qpc_A_2821qpc   A     EDO1,2-ETHANEDIOL E - 288
1qpc_A_2821qpc   A     EDO1,2-ETHANEDIOL M - 292
1qpc_A_2821qpc   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER V - 301
1qpc_A_2821qpc   A     EDO1,2-ETHANEDIOL V - 301
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h1w_A_1241h1w   A PIFPIF-POCKET (BIONDI ET AL., 2000)V - 124
1h1w_A_1241h1w   A PIFPIF-POCKET (BIONDI ET AL., 2000)V - 127
1h1w_A_1241h1w   A AC1SEP BINDING SITE FOR CHAIN AR - 129
1h1w_A_1241h1w   A AC8GOL BINDING SITE FOR CHAIN AE - 130
1h1w_A_1241h1w   A PPBPHOSPHOPEPTIDE BINDING SITER - 131
1h1w_A_1241h1w   A BC5SO4 BINDING SITE FOR CHAIN AR - 136
1h1w_A_1241h1w   A BC3SO4 BINDING SITE FOR CHAIN AP - 140
1h1w_A_1241h1w   A BC2SO4 BINDING SITE FOR CHAIN AY - 146
1h1w_A_1241h1w   A PPBPHOSPHOPEPTIDE BINDING SITET - 148
1h1w_A_1241h1w   A BC1SO4 BINDING SITE FOR CHAIN AF - 149
1h1w_A_1241h1w   A PPBPHOSPHOPEPTIDE BINDING SITEQ - 150

Clusters included in this Subclass
CLUSTER: HE.10.1
CLUSTER: HE.11.2
CLUSTER: HE.9.0