Information on SUBCLASS 8.4.1 |
Subclass Accession number: 8716
Subclass: 8.4.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 9 Average sequence ID (%) : 43.1 +/- 28.4 Average RMSD (Å) : 0.433 +/- 0.071 Consensus geometry
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Consensus Sequence: | XXpXXXhpppMh |
(φψ)-conformation: | aabapppbaabb |
Pattern: | [HNR] | [AENPST] | x | [C] | [akl] | x | [ASV] | [hsty] | [kprs] | x | [ikmt] | [IV] | [STY] | [DENPQS] | [NSV] | [M] | [FL] | [C] | [A] |
Conservation: | -0.012 | -0.615 | -0.805 | 2.418 | -0.600 | -0.826 | -0.436 | -0.641 | -0.751 | -0.895 | -0.690 | 0.452 | -0.166 | -0.386 | -0.178 | 0.988 | 0.095 | 2.418 | 0.631 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ao5_A_165 | 1ao5 | A | 165 | 183 | NENCAKVYLQKVTDVMLCA | HHHHHHH-SS---TTEEEE | aaaaaaaxaxxbbaabbbb |
1aut_C_165 | 1aut | C | 165 | 183 | HNECSEVMSNMVSENMLCA | HHHHHHH-SS---TTEEEE | aaaaaaaxaxxxxaabbbb |
1etr_H_165 | 1etr | H | 165 | 183 | RPVCKASTRIRITDNMFCA | HHHHHHT-SS---TTEEEE | aaaaaaabaxxxbaabbbb |
1g2l_A_168 | 1g2l | A | 168 | 186 | RNSCKLSSSFIITQNMFCA | HHHHHHH-SS---TTEEEE | aaaaaaaxabxbxaabbbb |
1h8d_H_165 | 1h8d | H | 165 | 183 | RPVCKDSTRIRITDNMFCA | HHHHHHT-SS---TTEEEE | aaaaaaabaxxxbaabbbb |
1kig_H_165 | 1kig | H | 165 | 183 | RSTCKLSSSFTITPNMFCA | HHHHHHH-SS---TTEEEE | aaaaaaaxaxxxbaabbbb |
1pfx_C_165 | 1pfx | C | 165 | 183 | RATCLRSTKFTIYSNMFCA | HHHHHHH-SS---TTEEEE | aaaaaaabaxxxxaabbbb |
1rfn_A_165 | 1rfn | A | 165 | 183 | RATCLRSTKFTIYNNMFCA | HHHHHHH-SS---TTEEEE | aaaaaaabaxxxxaabbbb |
2pka_B_165 | 2pka | B | 165 | 183 | NTFCADAHPDKVTESMLCA | HHHHHHH-SSB--TTEEEE | aaaaaaababxbbaabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HE.7.20 |
CLUSTER: HE.8.8 |