ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 9.2.1

Subclass Accession number: 8736
Subclass: 9.2.1

Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 5

Average sequence ID (%) : 50.8 +/- 24.8
Average RMSD (Å) : 0.620 +/- 0.228

Consensus geometry

d (Å): 11

delta (°): 90-135

theta (°): 135-180

rho (°): 225-270

Consensus Sequence:	XhSPhXpGLhpRh
(φψ)-conformation:	aapaaapgababb

Pattern:	[A]	[G]	[GS]	[aem]	[S]	[IV]	[ANS]	[ALV]	x	[LTV]	[ALM]	x	[P]	[ALVY]	[ANT]	[KR]	[GN]	[L]	[FIV]	[HKQR]	[KR]	[AG]	[IM]	x	[EQ]
Conservation:	0.805	2.074	0.212	-1.336	0.805	0.523	-0.655	-0.900	-0.931	-0.793	-0.757	-0.533	2.709	-1.297	-1.013	0.582	0.409	0.805	-0.465	-0.563	0.594	-0.190	0.022	-0.594	0.488

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1dx4_A_239	1dx4	A	239	263	AGSSSVNAQLMSPVTRGLVKRGMMQ	HHHHHHHHHHH-TTTTTS--EEEEE	aaaaaaaaaaapaaapgababbbbx
1f6w_A_195	1f6w	A	195	219	AGGASVSLQTLSPYNKGLIRRAISQ	HHHHHHHHHHH-GGGTTT-SEEEEE	aaaaaaaaaaaxaaapvababbbbx
1mx1_A_1222	1mx1	A	1222	1246	AGGESVSVLVLSPLAKNLFHRAISE	HHHHHHHHHHT-GGGTTS-SEEEEE	aaaaaaaaaaabaaaxvababbbbb
1qe3_A_190	1qe3	A	190	214	AGGMSIAALLAMPAAKGLFQKAIME	HHHHHHHHHTT-GGGTTS-SEEEEE	aaaaaaaaaaaxaaapvababbbbb
2bce_*_195	2bce	-	195	219	AGGASVSLQTLSPYNKGLIKRAISQ	HHHHHHHHHHH-GGGTTT-SEEEEE	aaaaaaaaaaaxaaaxvababbbbb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1mx1_A_1222	1mx1	A	THATACRINE	A - 1222

Clusters included in this Subclass