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Information on SUBCLASS 10.2.1
Subclass Accession number: 8745
Subclass: 10.2.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 59.4 +/- 26.1
Average RMSD (Å) : 0.750 +/- 0.481

Consensus geometry
d (Å): 21 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: GcXpGCXPKXXXYp
(φψ)-conformation: aapbgbbaaappbb
Pattern: [AR][CT][CD][QR][CT][CH][f][NV][CH][DY][CG][AC][GY][EG][GKR][SV][KRT][G][C][ADN][P][K][lmw][ADR][itv][Y][ST][FY][QS][cfvw][DEKQS]
Conservation:-0.503-0.055-0.3140.1170.3970.159-0.515-0.8750.046-0.4480.0250.550-0.335-0.179-0.742-0.789-0.5681.4612.861-0.7211.9280.995-1.017-1.052-1.0531.9280.0051.085-0.283-1.423-0.689
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jia_A_401jia   A4070ATDRCCFVHDCCYEKVTGCDPKWDDYTYSWKHHHHHHHHHHHHHHT--SS-TTTS---EEEEaaaaaaaaaaaaaaaxbgbxaaaxxbbbbbb
1jlt_B_401jlt   B4070ATDRCCFVHDCCYGRVRGCNPKLAIYSYSFKHHHHHHHHHHHHHHT--SS-TTT----EEEEaaaaaaaaaaaaaaaxbgbxaaaxbbxbbxb
1m8r_A_401m8r   A4070ATDRCCFVHDCCYGKVTGCDPKMDVYSFSEEHHHHHHHHHHHHHHT--SS-TTT---EEEEEaaaaaaaaaaaaaaaxbgbbaaaxxbbbbbb
1oqs_B_401oqs   B4070ATDRCCFVHDCCYGGVKGCNPKLAIYSYSFQHHHHHHHHHHHHHHT--SS-TTT----EEEEaaaaaaaaaaaaaaaxbvbbaaaxbbbbbbb
1ows_B_401ows   B4373RCCQTHDNCYGAGGGSTGCAPKSRTYTYQCSHHHHHHHHHHHHHHTSTT--TTT----EEEEaaaaaaaaaaaaaaaxpUxbaaaxxbbbbbb
1vap_A_391vap   A3969ATDRCCFVHDCCYGKVTGCNPKMDIYTYSVDHHHHHHHHHHHHHHT--SS-TTT----EEEEaaaaaaaaaaaaaaaxbvbbaaaxxbbbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jia_A_401jia   A     CACALCIUM ION C - 45
1jia_A_401jia   A     CACALCIUM ION D - 49
1jlt_B_401jlt   B     MPD2-METHYL-2,4-PENTANEDIOL C - 45
1jlt_B_401jlt   B     MPD2-METHYL-2,4-PENTANEDIOL H - 48
1jlt_B_401jlt   B     MPD2-METHYL-2,4-PENTANEDIOL D - 49
1jlt_B_401jlt   B     MPD2-METHYL-2,4-PENTANEDIOL Y - 52
1m8r_A_401m8r   A     CDCADMIUM ION C - 45
1m8r_A_401m8r   A     BU11,4-BUTANEDIOL C - 45
1m8r_A_401m8r   A     CDCADMIUM ION F - 46
1m8r_A_401m8r   A     BU11,4-BUTANEDIOL H - 48
1m8r_A_401m8r   A     CDCADMIUM ION D - 49
1m8r_A_401m8r   A     BU11,4-BUTANEDIOL D - 49
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1jia_A_401jia   A ATAACTIVE SITE.H - 48

Clusters included in this Subclass
CLUSTER: HE.12.6
CLUSTER: HE.14.6