Information on SUBCLASS 11.6.1 |
Subclass Accession number: 8757
Subclass: 11.6.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 72.2 +/- -28.9 Average RMSD (Å) : 0.133 +/- 0.058 Consensus geometry
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Consensus Sequence: | TYYTPpYXXXDTDhL |
(φψ)-conformation: | aabbaapbppaappb |
Pattern: | [KR] | [L] | [T] | [Y] | [Y] | [T] | [P] | [DE] | [Y] | x | [PTV] | x | [D] | [T] | [D] | [IL] | [L] | [A] | [A] | [F] | [R] | [FMV] | [ST] | [P] |
Conservation: | -0.470 | -0.228 | 0.275 | 1.282 | 1.282 | 0.275 | 1.282 | -0.306 | 1.282 | -1.794 | -1.682 | -1.682 | 0.779 | 0.275 | 0.779 | -0.723 | -0.228 | -0.228 | -0.228 | 0.779 | 0.275 | -1.403 | -0.875 | 1.282 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gk8_A_21 | 1gk8 | A | 21 | 44 | RLTYYTPDYVVRDTDILAAFRMTP | HHHHB-TT----TT--EEEEEEEE | aaaabbaaxxxxaaxxbbbbxbbx |
1rbl_A_21 | 1rbl | A | 21 | 44 | KLTYYTPDYTPKDTDLLAAFRFSP | HHHHB-TT----TTSEEEEEEEEE | aaaaxbaaxbpxaaxxbbbbbbbx |
8ruc_A_21 | 8ruc | A | 21 | 44 | KLTYYTPEYETLDTDILAAFRVSP | HHHHB-TT----TT-EEEEEEEEE | aaaabbaaxbxxaaxxbbbbxbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gk8_A_21 | 1gk8 | A | EGLETHYLENE GLYCOL | R - 21 |
1gk8_A_21 | 1gk8 | A | EGLETHYLENE GLYCOL | T - 23 |
1gk8_A_21 | 1gk8 | A | EGLETHYLENE GLYCOL | Y - 24 |
1gk8_A_21 | 1gk8 | A | HYP4-HYDROXYPROLINE | Y - 29 |
1gk8_A_21 | 1gk8 | A | HYP4-HYDROXYPROLINE | R - 32 |
1gk8_A_21 | 1gk8 | A | HYP4-HYDROXYPROLINE | T - 34 |
1gk8_A_21 | 1gk8 | A | HYP4-HYDROXYPROLINE | D - 35 |
1gk8_A_21 | 1gk8 | A | HYP4-HYDROXYPROLINE | I - 36 |
Clusters included in this Subclass |
CLUSTER: HE.11.10 |