ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 11.8.1

Subclass Accession number: 8759
Subclass: 11.8.1

Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 3.4 (>75 %)  3.4.24 (>75 %)
GO : GO:0004175 (>75 %)  GO:0004222 (>75 %)  GO:0005509 (>75 %)  GO:0008233 (>75 %)  GO:0008237 (>75 %)  GO:0008270 (>75 %)  GO:0046914 (>75 %)
SCOP : 55485 (>75 %)  55486 (>75 %)  55490 (>75 %)

Number of loops: 2

Average sequence ID (%) : 54.1 +/- 0.0
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry

d (Å): 19

delta (°): 135-180

theta (°): 135-180

rho (°): 315-360

Consensus Sequence:	TFcRpShccXGXPhX
(φψ)-conformation:	aalppeaalalppbb

Pattern:	[AR]	[A]	[AG]	[V]	[D]	[A]	[HN]	[Y]	[Y]	[A]	[GK]	[KQ]	[T]	[Y]	[D]	[Y]	[Y]	[K]	[AN]	[T]	[F]	[GN]	[R]	[EN]	[S]	[IY]	[DN]	[DN]	x	[G]	[AS]	[P]	[IL]	[KV]	[S]	[LT]	[TV]
Conservation:	-1.284	-0.062	-0.877	-0.062	1.023	-0.062	-0.062	1.566	1.566	-0.062	-1.284	-0.605	0.480	1.566	1.023	1.566	1.566	0.480	-1.419	0.480	1.023	-0.605	0.480	-0.741	-0.062	-1.012	-0.334	-0.334	-1.148	1.023	-0.877	1.566	-0.605	-1.555	-0.062	-1.284	-1.012

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1bqb_A_65	1bqb	A	65	101	RAGVDANYYAKQTYDYYKNTFGRESYDNHGSPIVSLT	HHHHHHHHHHHHHHHHHHHHH---STTSS---EEEEE	aaaaaaaaaaaaaaaaaaaaavxbeaavavxxbbbbb
1npc_*_69	1npc	-	69	105	AAAVDAHYYAGKTYDYYKATFNRNSINDAGAPLKSTV	HHHHHHHHHHHHHHHHHHHHH---TTTTS---EEEEE	aaaaaaaaaaaaaaaaaaaaavxxeaavavxxbbbbb

Clusters included in this Subclass