Information on SUBCLASS 12.2.1 |
Subclass Accession number: 8761
Subclass: 12.2.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 39.3 +/- 13.8 Average RMSD (Å) : 0.500 +/- 0.100 Consensus geometry
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Consensus Sequence: | XXHpphcXpXSSphpX |
(φψ)-conformation: | aabpbpbaaabaapbp |
Pattern: | x | [A] | [C] | [FKT] | x | [H] | [QS] | [KR] | [FY] | [DN] | [HP] | [ERS] | [AEK] | [S] | [S] | [ST] | [FY] | [KQS] | [ANT] | x | [G] | [KQT] | [EPT] | [FL] | [AS] | [IL] | [HQ] | [Y] |
Conservation: | -1.202 | 0.354 | 2.613 | -1.252 | -1.152 | 2.162 | -0.435 | 0.164 | 0.683 | 0.206 | -0.150 | -0.851 | -0.851 | 0.354 | 0.354 | -0.117 | 0.786 | -0.650 | -0.901 | -0.803 | 1.258 | -0.801 | -0.901 | -0.161 | -0.288 | -0.067 | -0.063 | 1.710 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dpj_A_48 | 1dpj | A | 48 | 75 | LACFLHSKYDHEASSSYKANGTEFAIQY | HHHHTS--B-GGG-TT-EEEEEEEEEEE | aaaaabxbxbaaabaaxbxIvpxbbbxb |
1htr_B_48 | 1htr | B | 48 | 75 | QACTSHSRFNPSESSTYSTNGQTFSLQY | HHHHTS--B-GGG-TT-EEEEEEEEEEE | aaaaabxbxbaaabaaxbbavxxbbbbb |
3cms_*_48 | 3cms | - | 48 | 75 | NACKNHQRFDPRKSSTFQNLGKPLSIHY | HHHHTS--B-GGG-TT-EEEEEEEEEEE | aaaaabxbxbaaabaaxbpagpwbxOOa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dpj_A_48 | 1dpj | A | NAGN-ACETYL-D-GLUCOSAMINE | A - 66 |
1dpj_A_48 | 1dpj | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 67 |
1dpj_A_48 | 1dpj | A | NAGN-ACETYL-D-GLUCOSAMINE | G - 68 |
1dpj_A_48 | 1dpj | A | NAGN-ACETYL-D-GLUCOSAMINE | T - 69 |
Clusters included in this Subclass |
CLUSTER: HE.12.23 |