ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 15.3.1

Subclass Accession number: 8773
Subclass: 15.3.1

Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 3

Average sequence ID (%) : 93.3 +/- -81.7
Average RMSD (Å) : 0.100 +/- 0.000

Consensus geometry

d (Å): 29

delta (°): 135-180

theta (°): 90-135

rho (°): 270-315

Consensus Sequence:	XTWEGDAWKIGGGTNWGWY
(φψ)-conformation:	aabpeaaaaaaelpbaFbb

Pattern:	[L]	[G]	[LT]	[EGK]	[T]	[W]	[E]	[G]	[D]	[A]	[W]	[K]	[I]	[G]	[G]	[G]	[T]	[N]	[W]	[G]	[W]	[Y]	[A]	[Y]	[D]
Conservation:	-0.779	-0.013	-1.636	-1.885	-0.396	1.900	-0.396	-0.013	-0.013	-0.779	1.900	-0.396	-0.779	-0.013	-0.013	-0.013	-0.396	-0.013	1.900	-0.013	1.900	0.369	-0.779	0.369	-0.013

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1g72_A_219	1g72	A	219	243	LGTKTWEGDAWKIGGGTNWGWYAYD	HHHHTSSGGGGGG------S--EEE	aaaaabbeaaaaaaevxbaFbbbbb
1h4i_A_225	1h4i	A	225	249	LGTGTWEGDAWKIGGGTNWGWYAYD	HHHHTSSGGGGGG-B----S--EEE	aaaaabxeaaaaaaevxbaFbbbbb
1lrw_A_225	1lrw	A	225	249	LGLETWEGDAWKIGGGTNWGWYAYD	HHHHTSSTTGGGG------S--EEE	aaaaabxeaaaaaaevxbaFbbbbb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1g72_A_219	1g72	A	CACALCIUM ION	T - 235
1g72_A_219	1g72	A	PQQPYRROLOQUINOLINE QUINONE	T - 235
1g72_A_219	1g72	A	CACALCIUM ION	W - 237
1g72_A_219	1g72	A	PQQPYRROLOQUINOLINE QUINONE	W - 237
1h4i_A_225	1h4i	A	PQQPYRROLOQUINOLINE QUINONE	T - 241
1h4i_A_225	1h4i	A	CACALCIUM ION	T - 241
1h4i_A_225	1h4i	A	PQQPYRROLOQUINOLINE QUINONE	W - 243
1h4i_A_225	1h4i	A	CACALCIUM ION	W - 243
1lrw_A_225	1lrw	A	PQQPYRROLOQUINOLINE QUINONE	N - 242

Clusters included in this Subclass