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Information on SUBCLASS 16.1.1
Subclass Accession number: 8774
Subclass: 16.1.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 29.6 +/- 24.3
Average RMSD (Å) : 0.625 +/- 0.287

Consensus geometry
d (Å): 23 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: phGpXXXXXXXXphpNpphh
(φψ)-conformation: aagbappabpaaaaaapabb
Pattern: [AGS]xx[EPQ][ST][FVWY][G][ENR][GQ][AT]x[STV][NP]xxx[DE][ILW][DKY][N][AST][DNS][LVY][IV][FILM][AMV][FMW]
Conservation:-0.248-0.616-0.936-0.0560.440-0.2242.793-0.2770.1180.114-0.452-0.5360.279-0.503-1.022-1.3211.469-0.574-1.0592.793-0.1160.153-0.5280.965-0.270-0.4310.045
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aa6_*_1421aa6   -147173GLHQSVGNGAMSNAINEIDNTDLVFVFHHHHHHS--S-SS-GGGGGG-SEEEEEaaaaaavbaxxabxaaaaaaxabbbxb
1h0h_A_1601h0h   A165191ALAESYGRGAMTNHWIDLKNSDVILMMHHHHHHS--S-SS-TGGGGG-SEEEEEaaaaaagbaxpabbaaaaaaxabbbbb
1kqf_A_1981kqf   A203229SLAPTFGRGAMTNHWVDIKNANVVMVMHHHHHHS--S-SS-TGGGGG-SEEEEEaaaaaagbaxpabbaaaaaaxabbbbb
1q16_A_2261q16   A226252ASPQTWGEQTDVPESADWYNSSYIIAWHHHHHHS-S-----GGGGGG-SEEEEEaaaaaavbabbbxxaaaaaaxabbbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aa6_*_1421aa6   *     CSESELENOCYSTEINE G - 142
1aa6_*_1421aa6   *     CSESELENOCYSTEINE S - 144
1aa6_*_1421aa6   *     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE F - 173
1h0h_A_1601h0h   A     CSESELENOCYSTEINE S - 160
1h0h_A_1601h0h   A     SSULFUR ATOM S - 160
1h0h_A_1601h0h   A     CACALCIUM ION S - 160
1h0h_A_1601h0h   A     CSESELENOCYSTEINE A - 161
1h0h_A_1601h0h   A     SSULFUR ATOM A - 161
1h0h_A_1601h0h   A     CSESELENOCYSTEINE T - 162
1h0h_A_1601h0h   A     SSULFUR ATOM T - 162
1h0h_A_1601h0h   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE M - 191
1kqf_A_1981kqf   A     CSESELENOCYSTEINE G - 198
1kqf_A_1981kqf   A     CSESELENOCYSTEINE P - 199
1kqf_A_1981kqf   A     CSESELENOCYSTEINE T - 200
1kqf_A_1981kqf   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE M - 229
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h0h_A_1601h0h   A 3APUTATIVE CO2 CHANNELR - 172

Clusters included in this Subclass
CLUSTER: HE.15.5