Information on SUBCLASS 24.1.1 |
Subclass Accession number: 8781
Subclass: 24.1.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.5 (>75 %) 3.5.2 (>75 %) 3.5.2.6 GO : GO:0008800 (>75 %) GO:0016810 (>75 %) GO:0016812 (>75 %) SCOP : 56600 (>75 %) 56601 (>75 %) 56602 (>75 %) |
Number of loops: 8 Average sequence ID (%) : 45.9 +/- 26.8 Average RMSD (Å) : 0.487 +/- 0.083 Consensus geometry
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Consensus Sequence: | phGDpXTphpRhEhpLNphXhGpXpDTp |
(φψ)-conformation: | aagpaapbbabppwaaaalppgpaplbb |
Pattern: | [AEK] | [AGKS] | [LMV] | [KT] | [ADKQR] | [EFR] | [ALMV] | [KR] | [EKQS] | [ILV] | [GN] | [D] | [ekr] | x | [FTY] | [NR] | [LP] | [dv] | [R] | [fkwy] | [DE] | [ILPV] | [DE] | [L] | [NQ] | [ESTY] | [AGVY] | x | [hp] | [GK] | [DERS] | x | [KQRT] | [D] | [T] | [ST] |
Conservation: | -0.518 | -0.798 | 0.099 | -0.076 | -0.747 | -0.893 | -0.509 | 0.939 | -0.390 | 0.337 | 0.913 | 2.261 | -0.667 | -1.336 | -0.400 | 0.317 | -0.655 | -0.340 | 1.664 | -0.743 | 1.039 | -0.800 | 0.919 | 1.067 | 0.905 | -0.942 | -1.084 | -1.343 | -0.499 | 0.280 | -0.475 | -1.408 | -0.342 | 2.261 | 1.664 | 0.299 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1alq_*_145 | 1alq | - | 146 | 181 | KKVKQRLKELGDKVTNPVRYEIELNYYSPKSKKDTS | HHHHHHHHHTT--S------TTGGG---TT--TTEE | aaaaaaaaaavxaapbxabxxwaaaxxbaabaxlbb |
1bsg_*_146 | 1bsg | - | 146 | 181 | AAVTRFVRSLGDRVTRLDRWEPELNSAEPGRVTDTT | HHHHHHHHHTT-SS----S-TTGGG---TT--TTEE | aaaaaaaaaavxaapbbabxxwaaaalxaaxaxlbb |
1bue_A_144 | 1bue | A | 146 | 181 | EGMTKFMRSIGDEDFRLDRWELDLNTAIPGDERDTS | HHHHHHHHHTT-SS-B--S-TTGGG---TT--TTEE | aaaaaaaaaavxaapbbabxxwaaaalxpvxaxlbb |
1g6a_A_144 | 1g6a | A | 146 | 181 | KGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTT | HHHHHHHHHTT-SS-B----TTGGG---TT--TTEE | aaaaaaaaaagxaapbbabbxwaaaavxpvxaxlbb |
1ghp_A_145 | 1ghp | A | 146 | 181 | KKVKQRLKELGDKVTNPVRYDIELQYYSPKSKKDTS | HHHHHHHHHTT--S-B--S-TTGGG---TT--TTEE | aaaaaaaaaavxaapbxabxxwaaaxxbaabaplbb |
1hzo_A_145 | 1hzo | A | 146 | 181 | AKVTQFARSINDVTYRLDRKEPELNTAIHGDPRDTT | HHHHHHHHHTT-SS------TTGGG---TT--TTEE | aaaaaaaaaavbaapbbabbxwaaaalxxvbaxlbb |
1i2s_A_145 | 1i2s | A | 146 | 181 | ESLKKELRKIGDEVTNPERFEPELNEVNPGETQDTS | HHHHHHHHHTT--S------TTGGG---TT--TTEE | aaaaaaaaaagxaapbxabxxwaaaxbxpgxaxlbb |
1mfo_A_145 | 1mfo | A | 146 | 181 | AAVTAFARSVGDERTRLDRWEVELNSAIPGDPRDTS | HHHHHHHHHTT-SS----S-TTGGG---TT--TTEE | aaaaaaaaaavxaaxbbabbxwaaaalpaaxaxlbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ghp_A_145 | 1ghp | A | PNMOPEN FORM - PENICILLIN G | D - 166 |
1ghp_A_145 | 1ghp | A | PNMOPEN FORM - PENICILLIN G | I - 167 |
1ghp_A_145 | 1ghp | A | PNMOPEN FORM - PENICILLIN G | Q - 170 |
1i2s_A_145 | 1i2s | A | CITCITRIC ACID | E - 166 |
1i2s_A_145 | 1i2s | A | CITCITRIC ACID | N - 170 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1mfo_A_145 | 1mfo | A | ACTACTIVE SERINE 70 | E - 166 |
Clusters included in this Subclass |
CLUSTER: HE.25.0 |