Information on SUBCLASS 29.1.1 |
Subclass Accession number: 8782
Subclass: 29.1.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 62.2 +/- -10.8 Average RMSD (Å) : 0.467 +/- 0.058 Consensus geometry
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Consensus Sequence: | pXpcCFPCPXpGCPpMGHhADphXGKTXXVpQX |
(φψ)-conformation: | aalabbwppaaebpppeaaaaapaaaaabblpp |
Pattern: | [DEN] | x | [F] | [QT] | [AEQ] | [NS] | [DGK] | [C] | [F] | [P] | [C] | [P] | [AES] | [EK] | [G] | [C] | [P] | [KQ] | [M] | [G] | [H] | [FY] | [A] | [D] | [QR] | [FY] | [EP] | [G] | [K] | [T] | [AN] | [AGT] | [V] | [ES] | [Q] | [TV] | [FV] |
Conservation: | -0.794 | -1.496 | 0.657 | -0.998 | -1.215 | -0.515 | -1.449 | 1.921 | 0.657 | 1.078 | 1.921 | 1.078 | -1.262 | -0.584 | 0.657 | 1.921 | 1.078 | -0.587 | 0.236 | 0.657 | 1.500 | 0.185 | -0.185 | 0.657 | -0.587 | 0.116 | -0.700 | 0.657 | 0.236 | 0.236 | -1.121 | -1.356 | -0.185 | -0.868 | 0.236 | -0.868 | -0.917 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bu8_A_288 | 1bu8 | A | 289 | 325 | EKFQQNDCFPCPEEGCPKMGHYADQFEGKTATVEQTV | HHHHTT-S-S--TT---BSSGGGGG-TTTTSSSSEEE | aaaaavblbwpxaaebxxxeaaaaaxaaaaabbvxxb |
1eth_A_290 | 1eth | A | 290 | 326 | NVFTANKCFPCPSEGCPQMGHYADRFPGKTNGVSQVF | HHHHTT-S-S--TT---BSSTTGGG-SSSSSSS-EEE | aaaaavabbwxpaaebpxxeaaaaapaaaaaebvxxb |
1gpl_*_288 | 1gpl | - | 289 | 325 | DEFQESGCFPCPAKGCPKMGHFADQYPGKTNAVEQTF | HHHHTT-S-S--TT---BSSTTGGG-TTTTSSSSEEE | aaaaalaabwxxaaexxxxeaaaaaxaaaaabbvxxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1eth_A_290 | 1eth | A | NAGN-ACETYL-D-GLUCOSAMINE | V - 291 |
1eth_A_290 | 1eth | A | BMABETA-D-MANNOSE | S - 323 |
1eth_A_290 | 1eth | A | BMABETA-D-MANNOSE | V - 325 |
Clusters included in this Subclass |
CLUSTER: HE.29.0 |