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Information on SUBCLASS 1.1.1
Subclass Accession number: 8783
Subclass: 1.1.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 82

Average sequence ID (%) : 11.2 +/- 14.5
Average RMSD (Å) : 0.548 +/- 0.191

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XXpXX
(φψ)-conformation: aapaa
Pattern: [adegknqrst]xxx[adegknqrst][cdehknqrsty][adegnpqst]xx
Conservation:-0.158-1.3740.072-0.6351.4990.9601.157-0.663-0.856
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a6j_A_1211a6j   A128136AKRLADKTIHHHHT-HHHaaaaaxaaa
1ajs_A_3011ajs   A307315ARTLSDPELHHHHHSHHHaaaaabaaa
1akz_*_871akz   -94102SGEFGKPYFHHHHTSHHHaaaaaxaaa
1ars_*_3001ars   -307315ATILSNDALHHHHT-HHHaaaaabaaa
1axd_A_1881axd   A195203SGLMERPSVHHHHHSHHHaaaaapaaa
1c8k_A_7731c8k   A788796SALYKNPREHHHHTSHHHaaaaabaaa
1chk_A_941chk   A102110ATAAKDTVFHHHTTSHHHaaaaaxaaa
1cvu_A_971cvu   A101109NIVNNIPFLHHHHT-HHHaaaaabaaa
1d3y_A_3171d3y   A317325DFVRSFPEWHHHHT-HHHaaaaabaaa
1dfo_A_2661dfo   A276284LKEAMEPEFHHHTTSHHHaaaaaxaaa
1dmt_A_7141dmt   A720728GTLQNSAEFHHHHT-HHHaaaaabaaa
1dqa_A_5991dqa   A606614KAWLETSEGHHHHTSHHHaaaaaxaaa
1dv1_A_1071dv1   A110118IRLMGDKVSHHHHHSHHHaaaaabaaa
1e1h_A_801e1h   A95103ERIYSTDLGHHHHTSHHHaaaaabaaa
1eb6_A_1561eb6   A157165QDALNNADSHHHHTBHHHaaaaabaaa
1eb7_A_1191eb7   A124132QTLGSIPEYHHHHT-HHHaaaaabaaa
1eem_A_1971eem   A204212AAMKEDPTVHHHHT-HHHaaaaaxaaa
1exn_A_2501exn   A256264NLILVDLPTHHHHH-HHHaaaaaxaaa
1eyq_A_711eyq   A7280EELLETLDFHHHHT-HHHaaaaabaaa
1f05_A_2911f05   A296304WLHNEDQMAHHHHT-HHHaaaaabaaa
1f0k_A_711f0k   A7280KALIAAPLRHHHHT-HHHaaaaabaaa
1f0l_A_2061f0l   A218226ESLKEHGPIHHHHT-HHHaaaaaxaaa
1f0l_A_2911f0l   A291299SETADNLEKHHHHT-HHHaaaaabaaa
1fno_A_3241fno   A324332EKVVEHPHIHHHHTSTHHaaaaabaaa
1fp2_A_1721fp2   A177185LALRDCDFVHHHHT-HHHaaaaaxaaa
1g4i_A_401g4i   A5361KQAKKLDSCHHHHH-HHHaaaaaxaaa
1gee_A_1971gee   A197205AEKFADPEQHHHHHSHHHaaaaaxaaa
1gkm_A_3311gkm   A356364ISLMMDKHMHHHH-HHHHaaaaaxaaa
1gpu_A_1571gpu   A157165DGCLQEGISHHHHHSHHHaaaaaxaaa
1ho8_A_1801ho8   A191199QELAVIPEYHHHHTSHHHaaaaaxaaa
1hwx_A_2111hwx   A224232ENFIENASYHHHHT-HHHaaaaabaaa
1hzt_A_1601hzt   A163171VMQATNREAHHHHHSHHHaaaaaxaaa
1iay_A_3121iay   A319327AAMLSDEKFHHHTT-HHHaaaaaxaaa
1iqc_A_1071iqc   A112120KVVASMPQYHHHHT-HHHaaaaaxaaa
1itk_A_3701itk   A373381IALKRDPDYHHHHHSHHHaaaaaxaaa
1itx_A_1701itx   A171179SDVAATAATHHHHTSHHHaaaaabaaa
1j11_A_3981j11   A399407QDVMYNNSLHHHHT-HHHaaaaabaaa
1j36_A_3901j36   A402410SLSVSTPKHHHHHHSHHHaaaaaxaaa
1j7n_A_2511j7n   A258266ELKDQRMLSHHHTT-HHHaaaaaxaaa
1j8u_A_3451j8u   A345353AGLLSSFGEHHHHT-HHHaaaaabaaa
1jdr_A_2331jdr   A236244YSLIQDPKYHHHHHSHHHaaaaaxaaa
1ji1_A_5331ji1   A543551TIRNQYPALHHHHH-HHHaaaaabaaa
1ji2_A_4811ji2   A492500RLRHRLASLHHHHH-HHHaaaaabaaa
1jqo_A_5741jqo   A579587ERLFSVDWYHHHHT-HHHaaaaaxaaa
1kf6_B_1531kf6   B153161LCYAACPQFHHHHH-HHHaaaaaxaaa
1kqn_A_1901kqn   A195203KFIYESDVLHHHHT-HHHaaaaabaaa
1l0l_A_1241l0l   A139147QENDTSMRDHHHTT-HHHaaaaaxaaa
1l0l_B_3541l0l   B369377LMSVESSEGHHHTSSHHHaaaaaxaaa
1l5r_A_7731l5r   A788796SQLYMNPKAHHHHT-HHHaaaaabaaa
1l5x_A_1321l5x   A133141NELLNNKEAHHHHT-HHHaaaaabaaa
1l9x_A_1771l9x   A178186KNFTMNEKLHHHHT-HHHaaaaabaaa
1lg2_A_1041lg2   A107115TDMVATANNHHHHTSHHHaaaaabaaa
1lm4_A_281lm4   A4149LVNSQDEEIHHHHHSHHHaaaaaxaaa
1lm6_A_401lm6   A5361LKHSQDPVMHHHHT-HHHaaaaaxaaa
1lqy_A_281lqy   A4149VKMSQDPELHHHHTSHHHaaaaabaaa
1ltz_A_1991ltz   A199207AGILSSKSEHHHHT-HHHaaaaabaaa
1m56_A_3791m56   A398406GIVLSQASVHHHHHSHHHaaaaaxaaa
1m7y_A_3071m7y   A314322SAMLSDKKLHHHHH-HHHaaaaaxaaa
1mlw_A_3321mlw   A332340AGLLSSISEHHHHT-HHHaaaaabaaa
1n2a_A_1761n2a   A183191QRMAERPEVHHHHTSHHHaaaaaxaaa
1n62_C_781n62   C7987HALIGSDFLHHHHH-HHHaaaaaxaaa
1oac_A_1891oac   A197205NIINNSEEFHHHHT-HHHaaaaabaaa
1ogi_A_1591ogi   A166174LWRMFKDAEHHHHH-HHHaaaaaxaaa
1onr_A_2781onr   A283291WQHNQDPMAHHHHT-HHHaaaaabaaa
1p1j_A_3551p1j   A357365GYNLSAPKQHHHHTSHHHaaaaaxaaa
1p3w_A_3631p3w   A379387RLRDLSPLWHHHHS-HHHaaaaabaaa
1pmi_*_1551pmi   -160168KTLATVPELHHHHH-HHHaaaaabaaa
1qgd_A_1551qgd   A155163DGCMMEGISHHHHHSHHHaaaaaxaaa
1qho_A_3871qho   A397405GLRRNNAAIHHHHH-HHHaaaaabaaa
1qop_B_221qop   B3341VSAQKDPEFHHHHT-HHHaaaaaxaaa
1toh_*_3911toh   -391399AGLLSSYGEHHHHT-HHHaaaaabaaa
1udg_*_331udg   -3745EPELANPLTHHHHTSHHHaaaaapaaa
1uok_*_4601uok   -469477ELRKNNEIVHHHHH-HHHaaaaabaaa
1yaa_A_3001yaa   A307315AKLLETPELHHHHHSHHHaaaaabaaa
2ay1_A_3012ay1   A307315STVLTTPELHHHHHSHHHaaaaaxaaa
2cb5_A_82cb5   A1624QKLNSDPQFHHHHT-HHHaaaaaxaaa
2cbl_A_1062cbl   A107115ETLGENEYFHHHHH-HHHaaaaapaaa
2cst_A_3012cst   A307315ATTLTSPQLHHHHH-HHHaaaaabaaa
2fok_A_1462fok   A154162EAISSYPPAHHHHT-HHHaaaaabaaa
2hgs_A_692hgs   A7785DAVSQNAAFHHHHH-HHHaaaaaxaaa
3gcb_*_73gcb   -1523KEFQSDLTHHHHHTSHHHaaaaaxaaa
7aat_A_3007aat   A307315SLILNTPELHHHHH-HHHaaaaabaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dmt_A_7141dmt   A     ZNZINC ION R - 717
1dmt_A_7141dmt   A     RDFN-ALPHA-L-RHAMNOPYRANOSYLOXY(HYDROXYPHOSPHINYL)-L-LEUCYL-L-TRYPTOPHAN R - 717
1eb6_A_1561eb6   A     ZNZINC ION A - 163
1eb6_A_1561eb6   A     ZNZINC ION D - 164
1eb6_A_1561eb6   A     EDO1,2-ETHANEDIOL D - 164
1eb6_A_1561eb6   A     EDO1,2-ETHANEDIOL A - 167
1eb6_A_1561eb6   A     EDO1,2-ETHANEDIOL L - 168
1eb6_A_1561eb6   A     EDO1,2-ETHANEDIOL A - 170
1eb6_A_1561eb6   A     EDO1,2-ETHANEDIOL N - 171
1eb6_A_1561eb6   A     EDO1,2-ETHANEDIOL A - 172
1eb6_A_1561eb6   A     EDO1,2-ETHANEDIOL E - 174
1eb6_A_1561eb6   A     EDO1,2-ETHANEDIOL L - 175
1exn_A_2501exn   A     MSESELENOMETHIONINE L - 253
1exn_A_2501exn   A     MSESELENOMETHIONINE N - 256
1exn_A_2501exn   A     MSESELENOMETHIONINE L - 262
1exn_A_2501exn   A     MSESELENOMETHIONINE C - 266
1exn_A_2501exn   A     MSESELENOMETHIONINE I - 270
1eyq_A_711eyq   A     SULSULFATE ANION E - 76
1eyq_A_711eyq   A     SULSULFATE ANION L - 78
1eyq_A_711eyq   A     SULSULFATE ANION R - 82
1fno_A_3241fno   A     MSESELENOMETHIONINE E - 324
1fno_A_3241fno   A     MSESELENOMETHIONINE K - 325
1fno_A_3241fno   A     MSESELENOMETHIONINE V - 326
1fno_A_3241fno   A     MSESELENOMETHIONINE V - 327
1fno_A_3241fno   A     MSESELENOMETHIONINE L - 333
1fno_A_3241fno   A     MSESELENOMETHIONINE I - 335
1fno_A_3241fno   A     MSESELENOMETHIONINE A - 336
1fno_A_3241fno   A     MSESELENOMETHIONINE Q - 337
1fno_A_3241fno   A     MSESELENOMETHIONINE Q - 338
1g4i_A_401g4i   A     CACALCIUM ION C - 45
1g4i_A_401g4i   A     MPD2-METHYL-2,4-PENTANEDIOL C - 45
1g4i_A_401g4i   A     MPD2-METHYL-2,4-PENTANEDIOL H - 48
1g4i_A_401g4i   A     CACALCIUM ION D - 49
1g4i_A_401g4i   A     MPD2-METHYL-2,4-PENTANEDIOL D - 49
1g4i_A_401g4i   A     MPD2-METHYL-2,4-PENTANEDIOL Y - 52
1gee_A_1971gee   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE F - 200
1gpu_A_1571gpu   A     CACALCIUM ION D - 157
1gpu_A_1571gpu   A     THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE D - 157
1gpu_A_1571gpu   A     CACALCIUM ION G - 158
1gpu_A_1571gpu   A     THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE G - 158
1gpu_A_1571gpu   A     THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE C - 159
1gpu_A_1571gpu   A     THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE E - 162
1hwx_A_2111hwx   A     GLUGLUTAMIC ACID R - 211
1hwx_A_2111hwx   A     GTPGUANOSINE-5'-TRIPHOSPHATE R - 211
1hwx_A_2111hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE R - 211
1hwx_A_2111hwx   A     GTPGUANOSINE-5'-TRIPHOSPHATE I - 212
1hwx_A_2111hwx   A     GTPGUANOSINE-5'-TRIPHOSPHATE S - 213
1hwx_A_2111hwx   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE T - 215
1hwx_A_2111hwx   A     GTPGUANOSINE-5'-TRIPHOSPHATE R - 217
1itk_A_3701itk   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 371
1j36_A_3901j36   A     ZNZINC ION H - 394
1j36_A_3901j36   A     ZNZINC ION E - 395
1j36_A_3901j36   A     LPR[N2-[(S)-1-CARBOXY-3-PHENYLPROPYL]-L-LYSYL-L-PROLINE E - 395
1j36_A_3901j36   A     LPR[N2-[(S)-1-CARBOXY-3-PHENYLPROPYL]-L-LYSYL-L-PROLINE D - 399
1j8u_A_3451j8u   A     FE2FE (II) ION A - 345
1j8u_A_3451j8u   A     FE2FE (II) ION G - 346
1jdr_A_2331jdr   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 234
1jdr_A_2331jdr   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 235
1kf6_B_1531kf6   B     FS4IRON/SULFUR CLUSTER L - 153
1kf6_B_1531kf6   B     F3SFE3-S4 CLUSTER C - 154
1kf6_B_1531kf6   B     FS4IRON/SULFUR CLUSTER C - 154
1kf6_B_1531kf6   B     FS4IRON/SULFUR CLUSTER Y - 155
1kf6_B_1531kf6   B     F3SFE3-S4 CLUSTER A - 157
1kf6_B_1531kf6   B     F3SFE3-S4 CLUSTER C - 158
1kf6_B_1531kf6   B     F3SFE3-S4 CLUSTER P - 159
1kf6_B_1531kf6   B     F3SFE3-S4 CLUSTER Q - 160
1kf6_B_1531kf6   B     F3SFE3-S4 CLUSTER F - 161
1kqn_A_1901kqn   A     XEXENON F - 196
1kqn_A_1901kqn   A     XEXENON S - 200
1kqn_A_1901kqn   A     XEXENON L - 203
1l5x_A_1321l5x   A     MSESELENOMETHIONINE W - 132
1l5x_A_1321l5x   A     GOLGLYCEROL E - 134
1l5x_A_1321l5x   A     MSESELENOMETHIONINE L - 135
1l5x_A_1321l5x   A     GOLGLYCEROL L - 135
1l5x_A_1321l5x   A     GOLGLYCEROL N - 138
1l5x_A_1321l5x   A     MSESELENOMETHIONINE E - 140
1l5x_A_1321l5x   A     MSESELENOMETHIONINE A - 141
1l5x_A_1321l5x   A     GOLGLYCEROL A - 141
1l5x_A_1321l5x   A     MSESELENOMETHIONINE V - 142
1l5x_A_1321l5x   A     MSESELENOMETHIONINE E - 143
1ltz_A_1991ltz   A     FEFE (III) ION A - 199
1ltz_A_1991ltz   A     FEFE (III) ION G - 200
1m56_A_3791m56   A     CACALCIUM ION F - 391
1m56_A_3791m56   A     HEAHEME-A F - 391
1m56_A_3791m56   A     HEAHEME-A T - 392
1m56_A_3791m56   A     HEAHEME-A G - 394
1m56_A_3791m56   A     HEAHEME-A G - 395
1m56_A_3791m56   A     HEAHEME-A V - 396
1m56_A_3791m56   A     HEAHEME-A G - 398
1m56_A_3791m56   A     HEAHEME-A I - 399
1m56_A_3791m56   A     CACALCIUM ION L - 401
1m56_A_3791m56   A     HEAHEME-A L - 401
1m56_A_3791m56   A     HEAHEME-A S - 402
1m56_A_3791m56   A     HEAHEME-A Q - 403
1m56_A_3791m56   A     CACALCIUM ION D - 407
1m56_A_3791m56   A     HEAHEME-A D - 407
1m56_A_3791m56   A     HEAHEME-A Y - 410
1mlw_A_3321mlw   A     FEFE (III) ION A - 332
1mlw_A_3321mlw   A     FEFE (III) ION G - 333
1n62_C_781n62   C     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 78
1ogi_A_1591ogi   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 160
1ogi_A_1591ogi   A     FADFLAVIN-ADENINE DINUCLEOTIDE P - 161
1p1j_A_3551p1j   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE N - 355
1p1j_A_3551p1j   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE D - 356
1p1j_A_3551p1j   A     CRYPROPANE-1,2,3-TRIOL D - 356
1p1j_A_3551p1j   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE N - 359
1p1j_A_3551p1j   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE L - 360
1p1j_A_3551p1j   A     CRYPROPANE-1,2,3-TRIOL L - 360
1p1j_A_3551p1j   A     PO4PHOSPHATE ION K - 369
1p1j_A_3551p1j   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE K - 369
1p1j_A_3551p1j   A     CRYPROPANE-1,2,3-TRIOL K - 369
1p1j_A_3551p1j   A     PO4PHOSPHATE ION K - 373
1p1j_A_3551p1j   A     CRYPROPANE-1,2,3-TRIOL K - 373
1qgd_A_1551qgd   A     CACALCIUM ION D - 155
1qgd_A_1551qgd   A     TPPTHIAMINE DIPHOSPHATE D - 155
1qgd_A_1551qgd   A     CACALCIUM ION G - 156
1qgd_A_1551qgd   A     TPPTHIAMINE DIPHOSPHATE G - 156
1qgd_A_1551qgd   A     TPPTHIAMINE DIPHOSPHATE C - 157
1qgd_A_1551qgd   A     TPPTHIAMINE DIPHOSPHATE M - 159
1qgd_A_1551qgd   A     TPPTHIAMINE DIPHOSPHATE E - 160
1toh_*_3911toh   *     FEFE (III) ION A - 391
1toh_*_3911toh   *     FEFE (III) ION G - 392
2cbl_A_1062cbl   A     CACALCIUM ION N - 121
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gpu_A_1571gpu   A AC1CA BINDING SITE FOR CHAIN AD - 157
1gpu_A_1571gpu   A AC2THD BINDING SITE FOR CHAIN AE - 162
1ogi_A_1591ogi   A AC1FAD BINDING SITE FOR CHAIN AT - 160
1qgd_A_1551qgd   A TPACOFACTOR BINDINGD - 155
1qgd_A_1551qgd   A TPACOFACTOR BINDINGG - 156

Clusters included in this Subclass
CLUSTER: HH.0.5
CLUSTER: HH.1.31
CLUSTER: HH.1.5
CLUSTER: HH.2.5
CLUSTER: HH.3.156
CLUSTER: HH.3.4