Information on SUBCLASS 1.1.9 |
Subclass Accession number: 8791
Subclass: 1.1.9 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 18 Average sequence ID (%) : 9.9 +/- 13.2 Average RMSD (Å) : 0.550 +/- 0.182 Consensus geometry
|
Consensus Sequence: | XXpXp |
(φψ)-conformation: | aapaa |
Pattern: | x | x | x | x | x | x | [dknrst] | [ekpqrs] | [dehkrst] | x | x |
Conservation: | -0.627 | -1.555 | -0.252 | -0.500 | 0.252 | 0.523 | 1.179 | 1.541 | 1.116 | -1.085 | -0.593 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b4u_A_35 | 1b4u | A | 40 | 50 | FAMSLMKAENR | HHHHTTSHHHH | aaaaaaxaaaa |
1b8a_A_124 | 1b8a | A | 124 | 134 | RFMDLRRPEVM | HHHHTTSHHHH | aaaaaaxaaaa |
1cke_A_94 | 1cke | A | 100 | 110 | ASQVAAFPRVR | HHHHTT-HHHH | aaaaaaxaaaa |
1eov_A_235 | 1eov | A | 235 | 245 | RVIDLRTVTNQ | HHHHTTSHHHH | aaaaaaxaaaa |
1es5_A_154 | 1es5 | A | 161 | 171 | ASSAMKNSTFR | HHHHTTSHHHH | aaaaaaxaaaa |
1f05_A_291 | 1f05 | A | 295 | 305 | RWLHNEDQMAV | HHHHHT-HHHH | aaaaaabaaaa |
1fxx_A_202 | 1fxx | A | 207 | 217 | YLFTHRNKHKL | HHHHT-SHHHH | aaaaaaxaaaa |
1g2i_A_72 | 1g2i | A | 73 | 83 | PERVRLNEKAV | HHHHTT-HHHH | aaaaaaxaaaa |
1h3f_A_149 | 1h3f | A | 149 | 159 | VAQMLEREDFK | HHHHTTSHHHH | aaaaaapaaaa |
1ho8_A_180 | 1ho8 | A | 190 | 200 | LQELAVIPEYR | HHHHHTSHHHH | aaaaaaxaaaa |
1l0l_B_354 | 1l0l | B | 368 | 378 | YLMSVESSEGF | HHHHTSSHHHH | aaaaaaxaaaa |
1l0w_A_131 | 1l0w | A | 131 | 141 | RYLDLRRRRMQ | HHHHTTSHHHH | aaaaaaxaaaa |
1lqy_A_28 | 1lqy | A | 40 | 50 | YVKMSQDPELA | HHHHHTSHHHH | aaaaaabaaaa |
1mdw_A_105 | 1mdw | A | 111 | 121 | IASLTLNEEIL | HHHHTT-HHHH | aaaaaabaaaa |
1n08_A_129 | 1n08 | A | 143 | 153 | ALNSMDRPSYS | HHHHHTSHHHH | aaaaaaxaaaa |
1nm8_A_235 | 1nm8 | A | 242 | 252 | YNTLIKDKVNR | HHHHTTSHHHH | aaaaaaxaaaa |
1onr_A_278 | 1onr | A | 282 | 292 | LWQHNQDPMAV | HHHHHT-HHHH | aaaaaabaaaa |
2occ_A_336 | 2occ | A | 354 | 364 | TGIVLANSSLD | HHHHTT-HHHH | aaaaaaxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g2i_A_72 | 1g2i | A | MSESELENOMETHIONINE | S - 84 |
1g2i_A_72 | 1g2i | A | MSESELENOMETHIONINE | I - 85 |
1g2i_A_72 | 1g2i | A | MSESELENOMETHIONINE | A - 86 |
1g2i_A_72 | 1g2i | A | MSESELENOMETHIONINE | R - 87 |
2occ_A_336 | 2occ | A | HEAHEME-A | F - 348 |
2occ_A_336 | 2occ | A | HEAHEME-A | T - 349 |
2occ_A_336 | 2occ | A | HEAHEME-A | V - 350 |
2occ_A_336 | 2occ | A | HEAHEME-A | G - 351 |
2occ_A_336 | 2occ | A | HEAHEME-A | G - 352 |
2occ_A_336 | 2occ | A | HEAHEME-A | L - 353 |
2occ_A_336 | 2occ | A | HEAHEME-A | G - 355 |
2occ_A_336 | 2occ | A | HEAHEME-A | I - 356 |
2occ_A_336 | 2occ | A | HEAHEME-A | L - 358 |
2occ_A_336 | 2occ | A | HEAHEME-A | A - 359 |
2occ_A_336 | 2occ | A | HEAHEME-A | N - 360 |
2occ_A_336 | 2occ | A | HEAHEME-A | D - 364 |
2occ_A_336 | 2occ | A | HEAHEME-A | L - 367 |
Clusters included in this Subclass |
CLUSTER: HH.2.23 |
CLUSTER: HH.3.15 |
CLUSTER: HH.3.189 |