Information on SUBCLASS 1.1.15 |
Subclass Accession number: 8797
Subclass: 1.1.15 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 10.8 +/- 10.7 Average RMSD (Å) : 0.460 +/- 0.167 Consensus geometry
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Consensus Sequence: | XppPX |
(φψ)-conformation: | aapaa |
Pattern: | x | x | x | x | x | x | x | [DHRST] | [P] | x | [NSTV] | x |
Conservation: | -0.275 | -0.336 | 0.082 | -0.336 | -0.556 | -0.617 | 0.083 | -0.175 | 3.096 | -0.456 | -0.114 | -0.396 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1g8m_A_452 | 1g8m | A | 464 | 475 | NSWWLRHHPRVL | HHHHHTT-HHHH | aaaaaaapaaaa |
1gow_A_32 | 1gow | A | 32 | 43 | DWYKWVHDPENM | HHHHHTT-HHHH | aaaaaaaxaaaa |
1gq8_A_290 | 1gq8 | A | 290 | 301 | STEAQGFTPGSF | HHHHHTTSHHHH | aaaaaaaxaaaa |
1ihu_A_408 | 1ihu | A | 413 | 424 | LLEEDLRSPCTE | HHHHHTTSHHHH | aaaaaaaxaaaa |
1pix_A_510 | 1pix | A | 521 | 532 | QAFYTKSRPKVC | HHHHHTTSHHHH | aaaaaaaxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g8m_A_452 | 1g8m | A | MSESELENOMETHIONINE | I - 453 |
1g8m_A_452 | 1g8m | A | MSESELENOMETHIONINE | H - 454 |
1g8m_A_452 | 1g8m | A | GGUANOSINE-5'-MONOPHOSPHATE | H - 454 |
1g8m_A_452 | 1g8m | A | MSESELENOMETHIONINE | R - 457 |
1g8m_A_452 | 1g8m | A | MSESELENOMETHIONINE | P - 472 |
1g8m_A_452 | 1g8m | A | MSESELENOMETHIONINE | R - 473 |
1g8m_A_452 | 1g8m | A | GGUANOSINE-5'-MONOPHOSPHATE | R - 473 |
1g8m_A_452 | 1g8m | A | MSESELENOMETHIONINE | V - 474 |
1g8m_A_452 | 1g8m | A | GGUANOSINE-5'-MONOPHOSPHATE | V - 474 |
1g8m_A_452 | 1g8m | A | MSESELENOMETHIONINE | L - 475 |
1g8m_A_452 | 1g8m | A | GGUANOSINE-5'-MONOPHOSPHATE | L - 475 |
1ihu_A_408 | 1ihu | A | CDCADMIUM ION | E - 416 |
1ihu_A_408 | 1ihu | A | CDCADMIUM ION | D - 417 |
1ihu_A_408 | 1ihu | A | CDCADMIUM ION | R - 419 |
1ihu_A_408 | 1ihu | A | CDCADMIUM ION | S - 420 |
1ihu_A_408 | 1ihu | A | CDCADMIUM ION | P - 421 |
1ihu_A_408 | 1ihu | A | CDCADMIUM ION | C - 422 |
1ihu_A_408 | 1ihu | A | CDCADMIUM ION | T - 423 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gq8_A_290 | 1gq8 | A | AC3CAC A 502 BINDING SITE | G - 299 |
Clusters included in this Subclass |
CLUSTER: HH.2.116 |
CLUSTER: HH.3.137 |
CLUSTER: HH.4.102 |