Information on SUBCLASS 1.1.19 |
Subclass Accession number: 8801
Subclass: 1.1.19 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 26.3 +/- 37.1 Average RMSD (Å) : 0.425 +/- 0.150 Consensus geometry
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Consensus Sequence: | ApXhX |
(φψ)-conformation: | aapaa |
Pattern: | [MP] | [SV] | [IL] | x | [ILM] | [ANV] | [AL] | [A] | [QT] | x | [MP] | [AES] | [KY] | [HQR] | [EKM] | x | [ILV] | x | [ADE] | [AD] | [ILV] | [AK] | [TWY] | [AGM] | x | [EKQ] |
Conservation: | 0.601 | -0.706 | 1.413 | -0.860 | 0.962 | -1.410 | -0.176 | 2.473 | 0.385 | -1.312 | 0.601 | -0.302 | 0.601 | 0.562 | -0.586 | -1.360 | 1.001 | -1.368 | -0.374 | -0.330 | 1.001 | 0.012 | 0.317 | -1.064 | -0.986 | 0.905 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1f05_A_46 | 1f05 | A | 46 | 71 | PSLILAAAQMPAYQELVEEAIAYGRK | HHHHHHHHTSGGGHHHHHHHHHHHHH | aaaaaaaaaxaaaaaaaaaaaaaaaa |
1f0j_A_328 | 1f0j | A | 337 | 362 | MVIDMVLATDMSKHMSLLADLKTMVE | HHHHHHHTT-GGGHHHHHHHHHHHHH | aaaaaaaaaxaaaaaaaaaaaaaaaa |
1onr_A_36 | 1onr | A | 36 | 61 | PSLILNAAQIPEYRKLIDDAVAWAKQ | HHHHHHHTTSGGGHHHHHHHHHHHHH | aaaaaaaaaxaaaaaaaaaaaaaaaa |
1oyn_A_254 | 1oyn | A | 263 | 288 | MVIDIVLATDMSKHMNLLADLKTMVE | HHHHHHHTTSGGGHHHHHHHHHHHHH | aaaaaaaaaxaaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1f0j_A_328 | 1f0j | A | ZNZINC ION | T - 345 |
1f0j_A_328 | 1f0j | A | MGMAGNESIUM ION | T - 345 |
1f0j_A_328 | 1f0j | A | ARSARSENIC | T - 345 |
1f0j_A_328 | 1f0j | A | ARSARSENIC | M - 347 |
1oyn_A_254 | 1oyn | A | ZNZINC ION | T - 271 |
1oyn_A_254 | 1oyn | A | ROLROLIPRAM | M - 273 |
Clusters included in this Subclass |
CLUSTER: HH.5.165 |
CLUSTER: HH.5.190 |
CLUSTER: HH.6.122 |
CLUSTER: HH.6.67 |