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Information on SUBCLASS 0.1.23
Subclass Accession number: 881
Subclass: 0.1.23 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.1 (>75 %)  2.1.1 (>75 %)  2.1.1.45
GO : GO:0008168 (>75 %)  GO:0016741 (>75 %)  GO:0042083 (>75 %)  
SCOP : 55830 (>75 %)  55831 (>75 %)  55832 (>75 %)  
 Number of loops: 7

Average sequence ID (%) : 7.7 +/- 12.1
Average RMSD (Å) : 0.857 +/- 0.079

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 0-45 rho (°): 90-135
Consensus Sequence: XXhp
(φψ)-conformation: bbaa
Pattern: [lmtv][antv][dgptv][adg][hqsty][afgiv]x[AFIKTV]
Conservation:1.902-0.227-1.1370.9540.083-0.934-0.465-0.175
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ep3_A_2661ep3   A267274VAVGTANFEEE-THHHbxbaaaaa
1gvf_A_2261gvf   A229236VNVATELKEEE-HHHHbxbaaaaa
1i58_A_3551i58   A355362MVPISFVFEEETHHHHbbxaaaaa
1m5w_A_2091m5w   A212219LNIGHAIIEEE-HHHHbbbaaaaa
1n67_A_3151n67   A318325TFTDYVNTEE-THHHHbxxaaaaa
1s5p_A_431s5p   A4653LTGAGISAEE-THHHHbbbaaaaa
1vk4_A_1361vk4   A137144SADAQGFVEEETHHHHbbbaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ep3_A_2661ep3   A     FMNFLAVIN MONONUCLEOTIDE A - 268
1ep3_A_2661ep3   A     FMNFLAVIN MONONUCLEOTIDE V - 269
1ep3_A_2661ep3   A     FMNFLAVIN MONONUCLEOTIDE G - 270
1ep3_A_2661ep3   A     FMNFLAVIN MONONUCLEOTIDE T - 271
1ep3_A_2661ep3   A     FMNFLAVIN MONONUCLEOTIDE A - 272
1ep3_A_2661ep3   A     FMNFLAVIN MONONUCLEOTIDE F - 274
1gvf_A_2261gvf   A     PGCO-PHOSPHOGLYCOLOHYDROXAMATE N - 230
1gvf_A_2261gvf   A     ZNZINC ION N - 230
1gvf_A_2261gvf   A     PGCO-PHOSPHOGLYCOLOHYDROXAMATE V - 231
1gvf_A_2261gvf   A     PGCO-PHOSPHOGLYCOLOHYDROXAMATE A - 232
1gvf_A_2261gvf   A     PGCO-PHOSPHOGLYCOLOHYDROXAMATE T - 233
1gvf_A_2261gvf   A     PGCO-PHOSPHOGLYCOLOHYDROXAMATE E - 234
1m5w_A_2091m5w   A     DXP1-DEOXY-D-XYLULOSE-5-PHOSPHATE N - 213
1m5w_A_2091m5w   A     PO4PHOSPHATE ION N - 213
1m5w_A_2091m5w   A     DXP1-DEOXY-D-XYLULOSE-5-PHOSPHATE I - 214
1m5w_A_2091m5w   A     PO4PHOSPHATE ION I - 214
1m5w_A_2091m5w   A     PO4PHOSPHATE ION G - 215
1m5w_A_2091m5w   A     PO4PHOSPHATE ION H - 216
1m5w_A_2091m5w   A     PO4PHOSPHATE ION A - 217
1n67_A_3151n67   A     MGMAGNESIUM ION V - 323
1n67_A_3151n67   A     MGMAGNESIUM ION N - 324
1n67_A_3151n67   A     MGMAGNESIUM ION T - 325
1vk4_A_1361vk4   A     MSESELENOMETHIONINE L - 136
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gvf_A_2261gvf   A AC1PGC BINDING SITE FOR CHAIN AN - 230
1gvf_A_2261gvf   A AC1PGC BINDING SITE FOR CHAIN AA - 232
1gvf_A_2261gvf   A AC1PGC BINDING SITE FOR CHAIN AT - 233

Clusters included in this Subclass
CLUSTER: EH.2.69