Logo
Information on SUBCLASS 1.2.13
Subclass Accession number: 8835
Subclass: 1.2.13 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 9.1 +/- 11.8
Average RMSD (Å) : 0.460 +/- 0.230

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: XXchp
(φψ)-conformation: aabaa
Pattern: x[ad][alvw][klv][ant][atv][dkn][pr][ADEQT][eqty][fgly]
Conservation:-0.517-0.131-1.081-0.288-0.0790.5120.3232.5100.500-0.806-0.944
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a88_A_1391a88   A146156RAALAANRAQFHHHHHH-HHHHaaaaaabaaaa
1gk9_A_871gk9   A104114IDKVNTNPETLHHHHHHSHHHHaaaaaabaaaa
1gwe_A_4591gwe   A467477EYWKNVDATIGHHHHHH-HHHHaaaaaabaaaa
1n7h_A_1191n7h   A119129VAVSFEIPDYTHHHHHHSHHHHaaaaaabaaaa
1pmi_*_691pmi   -7080RDLVTAKPQEYHHHHHH-HHHHaaaaaabaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gk9_A_871gk9   A     EDO1,2-ETHANEDIOL W - 103
1n7h_A_1191n7h   A     GDPGUANOSINE-5'-DIPHOSPHATE V - 119
1n7h_A_1191n7h   A     GDPGUANOSINE-5'-DIPHOSPHATE A - 120
1n7h_A_1191n7h   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Y - 128
1n7h_A_1191n7h   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 132
1n7h_A_1191n7h   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 133

Clusters included in this Subclass
CLUSTER: HH.1.55