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Information on SUBCLASS 1.2.15
Subclass Accession number: 8837
Subclass: 1.2.15 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 12.0 +/- 13.8
Average RMSD (Å) : 0.700 +/- 0.245

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: hppXp
(φψ)-conformation: aabaa
Pattern: [ART]xxx[HNS]x[ENQT][DE][DP][KNRS]xx[GKM]xxxx[AGN]
Conservation:0.074-0.548-0.700-0.5990.719-1.3080.1612.6142.1380.313-0.244-0.802-0.321-0.802-0.497-0.441-0.1670.412
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cqx_A_501cqx   A6380AYAENIEDPNSLMAVLKNHHHHHTT-HHHHHHHHHHaaaaaaabaaaaaaaaaa
1kyz_A_1621kyz   A162179AFEYHGTDPRFNKVFNKGHHHHGGG-HHHHHHHHHHaaaaaaabaaaaaaaaaa
1l9m_A_2021l9m   A204221TDVASRNDPKYVGRVLSAHHHHGGG-HHHHHHHHHHaaaaaaabaaaaaaaaaa
1lox_*_2141lox   -218235RVRDSWQEDSLFGYQFLNHHHHHTT-HHHHHHHHHHaaaaaaaxaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cqx_A_501cqx   A     DGG1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL A - 56
1cqx_A_501cqx   A     DGG1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL L - 57
1cqx_A_501cqx   A     DGG1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL R - 59
1cqx_A_501cqx   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 60
1cqx_A_501cqx   A     DGG1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL A - 60
1cqx_A_501cqx   A     DGG1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL V - 61
1cqx_A_501cqx   A     DGG1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL A - 63
1cqx_A_501cqx   A     DGG1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL Y - 64
1cqx_A_501cqx   A     DGG1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL L - 74
1cqx_A_501cqx   A     DGG1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL V - 77
1cqx_A_501cqx   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 78
1cqx_A_501cqx   A     DGG1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL L - 78
1cqx_A_501cqx   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 80
1cqx_A_501cqx   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 81
1cqx_A_501cqx   A     DGG1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL I - 81
1cqx_A_501cqx   A     HEMPROTOPORPHYRIN IX CONTAINING FE K - 84
1cqx_A_501cqx   A     FADFLAVIN-ADENINE DINUCLEOTIDE K - 84
1cqx_A_501cqx   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 85
1cqx_A_501cqx   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 88
1kyz_A_1621kyz   A     FER3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID A - 162
1kyz_A_1621kyz   A     SAHS-ADENOSYL-L-HOMOCYSTEINE F - 163
1kyz_A_1621kyz   A     FER3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID F - 163
1kyz_A_1621kyz   A     FER3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID H - 166
1kyz_A_1621kyz   A     FER3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID F - 172
1kyz_A_1621kyz   A     FER3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID F - 176
1kyz_A_1621kyz   A     SAHS-ADENOSYL-L-HOMOCYSTEINE M - 180
1kyz_A_1621kyz   A     FER3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID M - 180
1kyz_A_1621kyz   A     FER3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID H - 183
1kyz_A_1621kyz   A     SAHS-ADENOSYL-L-HOMOCYSTEINE S - 184
1l9m_A_2021l9m   A     CACALCIUM ION A - 221
1l9m_A_2021l9m   A     CACALCIUM ION M - 222

Clusters included in this Subclass
CLUSTER: HH.4.127