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Information on SUBCLASS 1.3.3
Subclass Accession number: 8858
Subclass: 1.3.3 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 9

Average sequence ID (%) : 11.1 +/- 14.2
Average RMSD (Å) : 0.511 +/- 0.136

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: pXchh
(φψ)-conformation: aalaa
Pattern: xx[dkqrty][aeknr]x[DGNQ][AFKLV][ilpw]xx
Conservation:-0.993-0.206-0.1240.638-0.7112.3140.645-0.7880.032-0.808
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1am7_A_881am7   A98107QIKERGALPMHHHHTT-HHHaaaaavaaaa
1d2z_A_391d2z   A4857HLDALDVWQQHHHHHT-HHHaaaaalaaaa
1fy2_A_901fy2   A96105ESRERGLLAPHHHHTT-HHHaaaaavaaaa
1gpw_B_551gpw   B6069RLRENDLIDFHHHHTT-HHHaaaaalaaaa
1io7_A_2111io7   A224233DFTRFNLWQRHHHHTT-HHHaaaaalaaaa
1jvn_A_531jvn   A5968NLFNRGFEKPHHHHTT-HHHaaaaavaaaa
1ohv_A_3581ohv   A370379IIKREDLLSNHHHHTTHHHHaaaaalaaaa
1thm_*_141thm   -1423GPQKIQAPQAHHHHTTHHHHaaaaalaaaa
2bce_*_4392bce   -439448LQYVFGKPFAHHHHTTHHHHaaaaalaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1am7_A_881am7   A     TRNNZ2-TRYPTOPHAN S - 90
1am7_A_881am7   A     TRNNZ2-TRYPTOPHAN Q - 91
1am7_A_881am7   A     TRNNZ2-TRYPTOPHAN V - 94
1am7_A_881am7   A     TRNNZ2-TRYPTOPHAN A - 95
1am7_A_881am7   A     TRNNZ2-TRYPTOPHAN L - 96
1am7_A_881am7   A     TRNNZ2-TRYPTOPHAN Q - 98
1am7_A_881am7   A     TRNNZ2-TRYPTOPHAN I - 99
1io7_A_2111io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 211
1io7_A_2111io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 213
1io7_A_2111io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 214
1io7_A_2111io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 217
1jvn_A_531jvn   A     143S-2,3-DIHYDRO-5-GLYCIN-2-YL-ISOXAZOL-3-YL-CYSTEINE Y - 53
1jvn_A_531jvn   A     NINICKEL (II) ION Y - 53

Clusters included in this Subclass
CLUSTER: HH.2.159
CLUSTER: HH.3.55