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Information on SUBCLASS 1.3.6
Subclass Accession number: 8861
Subclass: 1.3.6 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 12.7 +/- 12.3
Average RMSD (Å) : 0.400 +/- 0.163

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: pXGph
(φψ)-conformation: aalaa
Pattern: xx[FKM][AGIK][AKQR]xxx[DKRS]x[G][KRY][AFGT][ADS]x[AF][ANT]
Conservation:-0.653-0.9530.115-0.8250.204-0.525-0.112-0.653-0.010-0.5253.4180.485-0.5670.403-0.5250.3450.377
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c96_A_2741c96   A274290HRMKKYLSKTGRADIANHHHHHHHHHTT-HHHHHaaaaaaaaaavaaaaaa
1eu1_A_5111eu1   A513529DIFAALAERLGKGAEFTHHHHHHHHHTT-HHHHHaaaaaaaaaavaaaaaa
1gai_*_1261gai   -136152IGFGQWLLDNGYTSAATHHHHHHHHHTT-HHHHHaaaaaaaaaavaaaaaa
1k4g_A_3401k4g   A358374MQKIRDSISEGRFSQFAHHHHHHHHHTT-HHHHHaaaaaaaaaavaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1eu1_A_5111eu1   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE D - 511
1eu1_A_5111eu1   A     GLCGLUCOSE D - 513
1eu1_A_5111eu1   A     CDCADMIUM ION R - 521
1gai_*_1261gai   *     MANALPHA-D-MANNOSE E - 153
1k4g_A_3401k4g   A     ZNZINC ION H - 349
1k4g_A_3401k4g   A     ZNZINC ION N - 350
1k4g_A_3401k4g   A     ZNZINC ION A - 352
1k4g_A_3401k4g   A     ZNZINC ION F - 353
1k4g_A_3401k4g   A     ZNZINC ION Q - 356

Clusters included in this Subclass
CLUSTER: HH.4.122