Logo
Information on SUBCLASS 1.3.9
Subclass Accession number: 8864
Subclass: 1.3.9 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 10.0 +/- 13.6
Average RMSD (Å) : 0.833 +/- 0.115

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 0-45 rho (°): 45-90
Consensus Sequence: pXcXX
(φψ)-conformation: aalaa
Pattern: [ALP][AC][CQ]x[AL]xxxxx[NTY]x[GN][TV]x[CPT][RTY]x[DKQ]x
Conservation:-0.7531.8480.778-0.8820.6430.644-0.753-1.011-0.624-0.753-0.108-0.6242.3911.272-1.0110.021-0.495-0.4950.667-0.753
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c4k_A_5921c4k   A595614LCQELHDFYKNNNTFTYQKRHHHHHHHHHHTTTHHHHHHHaaaaaaaaaaaalaaaaaaa
1ps1_A_1661ps1   A166185AAQYLAMRRHTIGVQPTVDLHHHHHHHHHHHT-HHHHHHHaaaaaaaaaaaavaaaaaaa
1pwh_A_2681pwh   A268287PACGAALAAVYSGVVCRLQAHHHHHHHHHHHT-HHHHHHHaaaaaaaaaaaavaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1pwh_A_2681pwh   A     PLVN-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN -4-YL}METHYL)-O-METHYL-L-SERINE A - 269
1pwh_A_2681pwh   A     PLVN-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN -4-YL}METHYL)-O-METHYL-L-SERINE C - 270

Clusters included in this Subclass
CLUSTER: HH.3.170