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Information on SUBCLASS 2.1.4
Subclass Accession number: 8886
Subclass: 2.1.4 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 19

Average sequence ID (%) : 10.0 +/- 13.5
Average RMSD (Å) : 0.584 +/- 0.236

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XXXXXp
(φψ)-conformation: aappaa
Pattern: xxxx[adegknqst]x[dhpst]x[dehknpr][dehkqsty]x
Conservation:-1.316-1.034-1.141-0.6700.2190.6791.838-0.2981.1300.3930.200
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bw0_A_2931bw0   A301311EALLNTPQEHLHHHHSS-HHHHaaaaaxpaaaa
1d06_A_1241d06   A132142VRARDAHLRSIHHHHTS-HHHHaaaaaxxaaaa
1eov_A_2081eov   A208218LEDASRSEAEAHHHHTS-HHHHaaaaaxxaaaa
1exn_A_841exn   A8898EKYAQRTEEEKHHHHTS-HHHHaaaaaxxaaaa
1frf_S_1761frf   S176186KLFYGELVHDNHHHHSSBHHHHaaaaabxaaaa
1gz7_A_2741gz7   A276286ACLRGLSQDTLHHHHTS-HHHHaaaaaxxaaaa
1h4p_A_3021h4p   A302312SDQLERSIDEHHHHHT--HHHHaaaaaxxaaaa
1hzy_A_1361hzy   A136146LSMRLRSVEELHHHHT--HHHHaaaaaxxaaaa
1i01_A_1871i01   A187197DMTRALSDDQRHHHHTS-HHHHaaaaaxxaaaa
1j7n_A_2791j7n   A280290HWSDSLSEEGRHHHHT--HHHHaaaaaxxaaaa
1jq5_A_1561jq5   A157167KIIANAPPRLLHHHHTS-HHHHaaaaaxpaaaa
1k87_A_5771k87   A577587LDELVADPVTAHHHHT--HHHHaaaaaxxaaaa
1mtz_A_1341mtz   A143153RLIDELPAKYRHHHHTS-HHHHaaaaaxpaaaa
1mxr_A_581mxr   A6070IDYQALPEHEKHHHHTS-HHHHaaaaaxxaaaa
1pmi_*_1931pmi   -207217GKLMNTDDDVIHHHHTS-HHHHaaaaaxxaaaa
1qcf_A_3531qcf   A353363DEGSKQPLPKLHHHHT--HHHHaaaaaxxaaaa
1qpc_A_3311qpc   A331341PSGIKLTINKLHHHHT--HHHHaaaaaxxaaaa
1uqu_A_4051uqu   A413423DRALTMSLAERHHHHT--HHHHaaaaaxxaaaa
2frv_A_1772frv   A177187VMFFGETVHDNHHHHSSBHHHHaaaaabxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bw0_A_2931bw0   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) I - 314
1frf_S_1761frf   S     FEFE (III) ION V - 183
1frf_S_1761frf   S     FS4IRON/SULFUR CLUSTER V - 183
1frf_S_1761frf   S     FS3FE3-S4 CLUSTER V - 183
1frf_S_1761frf   S     FEFE (III) ION H - 184
1frf_S_1761frf   S     FS4IRON/SULFUR CLUSTER H - 184
1frf_S_1761frf   S     FEFE (III) ION D - 185
1frf_S_1761frf   S     FS4IRON/SULFUR CLUSTER D - 185
1h4p_A_3021h4p   A     NAGN-ACETYL-D-GLUCOSAMINE G - 322
1hzy_A_1361hzy   A     EGLETHYLENE GLYCOL L - 136
1hzy_A_1361hzy   A     EGLETHYLENE GLYCOL R - 139
1hzy_A_1361hzy   A     EGLETHYLENE GLYCOL L - 140
1hzy_A_1361hzy   A     EGLETHYLENE GLYCOL R - 141
1hzy_A_1361hzy   A     EGLETHYLENE GLYCOL S - 142
1hzy_A_1361hzy   A     EGLETHYLENE GLYCOL V - 143
1hzy_A_1361hzy   A     EGLETHYLENE GLYCOL T - 147
1hzy_A_1361hzy   A     EGLETHYLENE GLYCOL Q - 148
1hzy_A_1361hzy   A     EGLETHYLENE GLYCOL L - 151
1jq5_A_1561jq5   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 158
1jq5_A_1561jq5   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 159
1jq5_A_1561jq5   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE N - 161
1jq5_A_1561jq5   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE A - 162
1jq5_A_1561jq5   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE P - 163
1jq5_A_1561jq5   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE L - 166
1jq5_A_1561jq5   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE S - 169
1jq5_A_1561jq5   A     ZNZINC ION D - 173
1jq5_A_1561jq5   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 173
1k87_A_5771k87   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL L - 591
1k87_A_5771k87   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL E - 595
1mxr_A_581mxr   A     HGMERCURY (II) ION N - 76
1mxr_A_581mxr   A     FEFE (III) ION D - 84
1mxr_A_581mxr   A     FEFE (III) ION Q - 87
2frv_A_1772frv   A     FS4IRON/SULFUR CLUSTER V - 184
2frv_A_1772frv   A     FS3FE3-S4 CLUSTER V - 184
2frv_A_1772frv   A     FS4IRON/SULFUR CLUSTER H - 185
2frv_A_1772frv   A     FS4IRON/SULFUR CLUSTER D - 186

Clusters included in this Subclass
CLUSTER: HH.2.41
CLUSTER: HH.2.70
CLUSTER: HH.4.22
CLUSTER: HH.4.75