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Information on SUBCLASS 2.1.5
Subclass Accession number: 8887
Subclass: 2.1.5 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 17

Average sequence ID (%) : 13.4 +/- 14.7
Average RMSD (Å) : 0.671 +/- 0.247

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XXhpXp
(φψ)-conformation: aappaa
Pattern: xxx[aeklm][aeknrst][ceknrt][aklmv][ADPST]x[dehqr][degkqst]x
Conservation:-1.376-1.012-0.7890.535-0.043-0.2200.7611.872-0.9990.3811.312-0.421
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a4s_A_571a4s   A7182YLKWSKMAGIERHHHHTTS-HHHHaaaaaaxxaaaa
1a8q_*_1741a8q   -181192WYMAMAQTIEGGHHHHTTS-HHHHaaaaaaxxaaaa
1dc1_A_801dc1   A8091DKAKKFLTEDDKHHHHTT--HHHHaaaaaaxxaaaa
1dmt_A_3481dmt   A355366KPILTKYSARDLHHHHTTS-HHHHaaaaaabxaaaa
1fwx_A_611fwx   A6576RIHERTMSERTKHHHHTT--HHHHaaaaaapxaaaa
1i2t_A_10291i2t   A10331044TGMLLELSPAQLHHHHTTS-HHHHaaaaaaxxaaaa
1j7n_A_541j7n   A6071EKLLEKVPSDVLHHHHHTS-HHHHaaaaaaxpaaaa
1n3l_A_1271n3l   A134145YRLSSVVTQHDSHHHHTTS-HHHHaaaaaaxxaaaa
1n5m_A_2661n5m   A270281IACLRTRPAQDLHHHHTTS-HHHHaaaaaaxwaaaa
1nks_A_541nks   A5465RDEMRKLSVEKQHHHHTTS-HHHHaaaaaappaaaa
1o0s_A_5001o0s   A508519KKVASCVTEDSLHHHHHT--HHHHaaaaaaxxaaaa
1o20_A_31o20   A1526WDVLRNATTREKHHHHTT--HHHHaaaaaaxxaaaa
1oja_A_3471oja   A349360ARKLARLTKEERHHHHTTS-HHHHaaaaaaxxaaaa
1p0i_A_2571p0i   A261272IKCLRNKDPQEIHHHHTTS-HHHHaaaaaaxxaaaa
1q0s_A_531q0s   A5970YKRLINVSWDDVHHHHTT--HHHHaaaaaabbaaaa
1sur_*_131sur   -2435NAELEKLDAEGRHHHHTTS-HHHHaaaaaaxxaaaa
1sur_*_51sur   -516LNALNELPKVDRHHHHHTS-HHHHaaaaaaxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dc1_A_801dc1   A     DIO1,4-DIETHYLENE DIOXIDE K - 81
1dc1_A_801dc1   A     DIO1,4-DIETHYLENE DIOXIDE K - 84
1dc1_A_801dc1   A     DIO1,4-DIETHYLENE DIOXIDE F - 85
1dc1_A_801dc1   A     DIO1,4-DIETHYLENE DIOXIDE L - 86
1dc1_A_801dc1   A     DIO1,4-DIETHYLENE DIOXIDE D - 89
1dc1_A_801dc1   A     DIO1,4-DIETHYLENE DIOXIDE D - 90
1dc1_A_801dc1   A     DIO1,4-DIETHYLENE DIOXIDE K - 91
1dc1_A_801dc1   A     DIO1,4-DIETHYLENE DIOXIDE E - 93
1dc1_A_801dc1   A     DIO1,4-DIETHYLENE DIOXIDE S - 94
1dc1_A_801dc1   A     DIO1,4-DIETHYLENE DIOXIDE N - 97
1o20_A_31o20   A     MSESELENOMETHIONINE L - 4
1o20_A_31o20   A     MSESELENOMETHIONINE A - 34
1o20_A_31o20   A     MSESELENOMETHIONINE L - 37
1q0s_A_531q0s   A     SAHS-ADENOSYL-L-HOMOCYSTEINE I - 55

Clusters included in this Subclass
CLUSTER: HH.3.42
CLUSTER: HH.4.15
CLUSTER: HH.5.15