Information on SUBCLASS 2.1.25 |
Subclass Accession number: 8907
Subclass: 2.1.25 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 11.1 +/- 14.2 Average RMSD (Å) : 0.667 +/- 0.231 Consensus geometry
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Consensus Sequence: | ppXXpX |
(φψ)-conformation: | aappaa |
Pattern: | x | [AE] | [AFW] | x | [KQT] | [AEQ] | [AFL] | [RY] | [EQR] | x | [NPS] | [EY] | x | [ES] | [AI] |
Conservation: | -0.522 | 0.461 | -0.074 | -1.269 | -0.074 | 0.075 | -0.821 | 0.778 | 1.121 | -1.568 | -0.074 | 1.619 | -1.419 | 1.472 | 0.294 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ih7_A_757 | 1ih7 | A | 765 | 779 | KEFEKEFRQLNYISI | HHHHHHGGGS-HHHH | aaaaaaaaaxxaaaa |
1k87_A_90 | 1k87 | A | 92 | 106 | RAAITAAYRRPETEA | HHHHHHTTT--HHHH | aaaaaaaaappaaaa |
1lwy_A_222 | 1lwy | A | 222 | 236 | LAWLQQLRESSYEEA | HHHHHHTTTS-HHHH | aaaaaaaaaxxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1k87_A_90 | 1k87 | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | R - 101 |
1k87_A_90 | 1k87 | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | A - 106 |
1k87_A_90 | 1k87 | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | M - 109 |
1k87_A_90 | 1k87 | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | L - 110 |
1k87_A_90 | 1k87 | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | Q - 113 |
Clusters included in this Subclass |
CLUSTER: HH.5.182 |