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Information on SUBCLASS 2.1.25
Subclass Accession number: 8907
Subclass: 2.1.25 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 11.1 +/- 14.2
Average RMSD (Å) : 0.667 +/- 0.231

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: ppXXpX
(φψ)-conformation: aappaa
Pattern: x[AE][AFW]x[KQT][AEQ][AFL][RY][EQR]x[NPS][EY]x[ES][AI]
Conservation:-0.5220.461-0.074-1.269-0.0740.075-0.8210.7781.121-1.568-0.0741.619-1.4191.4720.294
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ih7_A_7571ih7   A765779KEFEKEFRQLNYISIHHHHHHGGGS-HHHHaaaaaaaaaxxaaaa
1k87_A_901k87   A92106RAAITAAYRRPETEAHHHHHHTTT--HHHHaaaaaaaaappaaaa
1lwy_A_2221lwy   A222236LAWLQQLRESSYEEAHHHHHHTTTS-HHHHaaaaaaaaaxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1k87_A_901k87   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL R - 101
1k87_A_901k87   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL A - 106
1k87_A_901k87   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL M - 109
1k87_A_901k87   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL L - 110
1k87_A_901k87   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL Q - 113

Clusters included in this Subclass
CLUSTER: HH.5.182