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Information on SUBCLASS 2.2.2
Subclass Accession number: 8918
Subclass: 2.2.2 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 22

Average sequence ID (%) : 15.0 +/- 16.9
Average RMSD (Å) : 0.714 +/- 0.217

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: XpXpXX
(φψ)-conformation: aalpaa
Pattern: xx[aeknqrst][acilmvy][aegkqrst]x[dgkns][DEHNQST][aegnpq]x[agstv][ackltv]
Conservation:-0.857-0.893-0.1410.366-0.283-0.1231.3061.946-0.120-1.6950.845-0.353
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ak2_*_471ak2   -5263RAMVASGSELGKHHHHHHT-HHHHaaaaaavxaaaa
1aky_*_351aky   -4051RSQIAKGTQLGLHHHHHTT-HHHHaaaaaavxaaaa
1bry_Y_1291bry   Y136147ITTLYYYTASSAHHHHHTT-HHHHaaaaaalxaaaa
1bsg_*_1191bsg   -124135EVSITASDNCAAHHHHHS--HHHHaaaaaalxaaaa
1bue_A_1191bue   A124135AAALQYSDNGATHHHHHS--HHHHaaaaaalpaaaa
1e25_A_1191e25   A124135QYSVSHSDNVACHHHHHH--HHHHaaaaaalxaaaa
1f7u_A_2461f7u   A252263FKRMEDGDEEALHHHHHHT-HHHHaaaaaavpaaaa
1frf_L_3851frf   L390401FIAYAKGQPDFKHHHHHTT-HHHHaaaaaavxaaaa
1g99_A_2841g99   A288299DEAASKGNRKAEHHHHHTT-HHHHaaaaaavxaaaa
1g9g_A_4131g9g   A424435ELYYKTGDARAKHHHHHH--HHHHaaaaaavpaaaa
1iib_A_811iib   A8192SLLYGKVDGLGVHHHHHTT-HHHHaaaaaalxaaaa
1k4g_A_3281k4g   A332343HHLIRAGEILGAHHHHHTT-HHHHaaaaaavxaaaa
1klx_A_771klx   A8596SKACGLNDQDGCHHHHHTT-HHHHaaaaaavxaaaa
1l5j_A_1281l5j   A133144EEKAKAGNEYAKHHHHHTT-HHHHaaaaaagxaaaa
1lwj_A_1001lwj   A102113FQKALKGDPHYRHHHHHTT-HHHHaaaaaagpaaaa
1mfo_A_1191mfo   A124135QAALQRSDNTAAHHHHHS--HHHHaaaaaalpaaaa
1nst_A_7061nst   A715726QHQRAHDDPVALHHHHHTT-HHHHaaaaaalxaaaa
1ubk_L_3871ubk   L392403LIAYSQGHPKVKHHHHHTT-HHHHaaaaaavxaaaa
1zin_*_311zin   -3647RAAMKEGTPLGLHHHHHHT-HHHHaaaaaavxaaaa
2ak3_A_362ak3   A4152RDNMLRGTEIGVHHHHHTT-HHHHaaaaaalxaaaa
2frv_B_3712frv   B376387LVAYAKKHEPTVHHHHHTT-HHHHaaaaaavxaaaa
3adk_*_393adk   -4455RAEVSSGSARGKHHHHHHT-HHHHaaaaaagxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aky_*_351aky   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE T - 35
1aky_*_351aky   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE G - 36
1aky_*_351aky   *     IMDIMIDAZOLE G - 36
1aky_*_351aky   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE D - 37
1aky_*_351aky   *     IMDIMIDAZOLE D - 37
1aky_*_351aky   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE L - 39
1aky_*_351aky   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE R - 40
1aky_*_351aky   *     IMDIMIDAZOLE R - 40
1aky_*_351aky   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE A - 53
1aky_*_351aky   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE I - 56
1aky_*_351aky   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE M - 57
1aky_*_351aky   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE D - 58
1g99_A_2841g99   A     ADPADENOSINE-5'-DIPHOSPHATE F - 284
1g99_A_2841g99   A     ADPADENOSINE-5'-DIPHOSPHATE R - 285
1g99_A_2841g99   A     ADPADENOSINE-5'-DIPHOSPHATE D - 286
1g99_A_2841g99   A     ADPADENOSINE-5'-DIPHOSPHATE D - 288
1k4g_A_3281k4g   A     ZNZINC ION H - 349
1k4g_A_3281k4g   A     ZNZINC ION N - 350
1k4g_A_3281k4g   A     ZNZINC ION A - 352
1k4g_A_3281k4g   A     ZNZINC ION F - 353
1k4g_A_3281k4g   A     ZNZINC ION Q - 356
1nst_A_7061nst   A     A3PADENOSINE-3'-5'-DIPHOSPHATE D - 708
1nst_A_7061nst   A     A3PADENOSINE-3'-5'-DIPHOSPHATE Y - 711
1nst_A_7061nst   A     A3PADENOSINE-3'-5'-DIPHOSPHATE S - 712
1nst_A_7061nst   A     A3PADENOSINE-3'-5'-DIPHOSPHATE W - 713
1nst_A_7061nst   A     A3PADENOSINE-3'-5'-DIPHOSPHATE Q - 715
1nst_A_7061nst   A     A3PADENOSINE-3'-5'-DIPHOSPHATE H - 716
1ubk_L_3871ubk   L     MPD2-METHYL-2,4-PENTANEDIOL L - 392
1ubk_L_3871ubk   L     MPD2-METHYL-2,4-PENTANEDIOL I - 393
1ubk_L_3871ubk   L     MPD2-METHYL-2,4-PENTANEDIOL Y - 395
1ubk_L_3871ubk   L     MPD2-METHYL-2,4-PENTANEDIOL S - 396
1ubk_L_3871ubk   L     MPD2-METHYL-2,4-PENTANEDIOL T - 406
1ubk_L_3871ubk   L     MPD2-METHYL-2,4-PENTANEDIOL D - 407
1ubk_L_3871ubk   L     MPD2-METHYL-2,4-PENTANEDIOL L - 410
1zin_*_311zin   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE T - 31
1zin_*_311zin   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE G - 32
1zin_*_311zin   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE D - 33
1zin_*_311zin   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE F - 35
1zin_*_311zin   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE R - 36
1zin_*_311zin   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE A - 49
1zin_*_311zin   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE Y - 52
1zin_*_311zin   *     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE M - 53
2ak3_A_362ak3   A     AMPADENOSINE MONOPHOSPHATE S - 36
2ak3_A_362ak3   A     AMPADENOSINE MONOPHOSPHATE G - 37
2ak3_A_362ak3   A     AMPADENOSINE MONOPHOSPHATE D - 38
2ak3_A_362ak3   A     AMPADENOSINE MONOPHOSPHATE L - 40
2ak3_A_362ak3   A     AMPADENOSINE MONOPHOSPHATE R - 41
2ak3_A_362ak3   A     AMPADENOSINE MONOPHOSPHATE F - 57
2ak3_A_362ak3   A     AMPADENOSINE MONOPHOSPHATE I - 58

Clusters included in this Subclass
CLUSTER: HH.2.22
CLUSTER: HH.3.16